Table 1 miRNA-seq quality control statistics
Sample | Read category | Number | Percentage |
|---|---|---|---|
L1 | total reads | 12,341,536 | 100.00% |
N% > 10% | 0 | 0.00 | |
low quality | 7942 | 0.06 | |
5′ adapter contamination | 1153 | 0.01% | |
3′ adapter null or insert null | 280,760 | 2.27% | |
containing polyA/T/G/C | 10,394 | 0.08% | |
clean reads | 12,041,287 | 97.57% | |
L2 | total_reads | 11,037,839 | 100.00% |
N% > 10% | 0 | 0.00 | |
low quality | 8657 | 0.08 | |
5_adapter_contamine | 559 | 0.01% | |
3_adapter_null or insert_null | 353,963 | 3.21% | |
with polyA/T/G/C | 6319 | 0.06% | |
clean reads | 10,668,341 | 96.65% | |
A1 | total_reads | 12,691,784 | 100.00% |
N% > 10% | 0 | 0.00 | |
low quality | 8732 | 0.07 | |
5_adapter_contamine | 452 | 0.00% | |
3_adapter_null or insert_null | 266,774 | 2.10% | |
with polyA/T/G/C | 5719 | 0.05% | |
clean reads | 12,410,107 | 97.78% | |
A2 | total_reads | 12,926,796 | 100.00% |
N% > 10% | 0 | 0.00 | |
low quality | 9846 | 0.08 | |
5_adapter_contamine | 691 | 0.01% | |
3_adapter_null or insert_null | 290,474 | 2.25% | |
with polyA/T/G/C | 9115 | 0.07% | |
clean reads | 12,616,670 | 97.60% |