Fig. 2

Phylogenetic relationship and analysis of gene families. a. Phylogenetic analysis of C. pseudoreteaudii and 13 other ascomycota fungi. Predicted pattern of gain and loss of gene families in 14 organisms used in this study. The numbers on the branches of the phylogenetic tree correspond to acquired (left, red), conserved (middle, black), lost (right, green), by comparison with the putative pan-proteome. b. The numbers represent counts of gene families which are either specific to each species or common shared among multiple species. Cp, C. pseudoreteaudii; Nd, Neonectria ditissima; Fs, Fusarium solani; Fg, F. graminearum; Fo, F. oxysporum; Fv, F. verticillioides