Fig. 5

Comparison and expression patterns of membrane transporter families in C. pseudoreteaudii and 13 ascomycota fungi. a. Hierarchical clustering of membrane transporter families from C. pseudoreteaudii and 13 fungal genomes. Tr, Trichoderma reesei; El, Eutypa lata; Cg, Colletotrichum graminicola; Nc, Neurospora crassa; Mo, Magnaporthe oryzae; Ss, Sclerotinia sclerotiorum; Bc, Botrytis cinerea; Ud, Ustilago maydis. Transporter families are represented by their family names according to the Transporter Collection Database (www.tcdb.org). Overrepresented (pink to red) and underrepresented (gray to blue) domains are depicted as Z-scores for each family. Approximately unbiased (AU) P-values (%) are computed by 1000 bootstrap resamplings by using the R package pvclust. b. Box-plot of gene expression of members in each membrane transporter family of C. pseudoreteaudii in Eucalyptus tissue medium culture (log2 fold-changes). The Tukey whiskers indicate 1.5 times the interquartile range from the 25th and 75th percentiles