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Fig. 2 | BMC Genomics

Fig. 2

From: Analysis of the canid Y-chromosome phylogeny using short-read sequencing data reveals the presence of distinct haplogroups among Neolithic European dogs

Fig. 2

Maximum likelihood phylogeny of 118 candid Y-chromosomes A Y-chromosome haplogroup tree produced by RAxML (8.1.13) using the GTR+ I model is depicted. Clades in the tree have been collapsed by haplogroup assignment. The number of samples within each collapsed node is indicated in parentheses next to the haplogroup assignment. For each node, percent bootstrap support out of 1000 iterations is indicated above the branch. The locations of three ancient samples, based on the presence of diagnostic mutations, are indicated in red

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