Table 1 Strains analysed in this study

0522A_28_397

A

–

Human

unknown

USA

+

NP

NCBI

MKXR0000000.1

1207_CPER

A

–

Hospital

unknown

USA

+

NP

[81]

JVYV0000000

2789STDY

A

–

Human

No Disease

–

+

NP

Sanger

CYYX0000000

94–5224

A

+

Chicken

Necrotic enteritis

USA

–

–

This study

^a

96–7415

A

+

Chicken

Necrotic enteritis

USA

+

3

This study

PJTF00000000

98.78718–2

A

+

Chicken

Necrotic enteritis

DEN

+

1B

[25]

PJTE00000000

ATCC3626

B

–

Lamb

–

–

+

NP

[18]

ABDV0000000

ATCC13124

A

–

Human

Gas Gangrene

–

+

NP

[14]

CP000246

BER-NE33²

A

–

Chicken

Necrotic enteritis

AUS

+

3

[25]

PJTD00000000

CP4¹

A

+

Chicken

Necrotic enteritis

CAN

+

1A

[23]

LIYI0000000

EHE-NE3

A

+

Chicken

Necrotic enteritis

AUS

–

–

[82]

^a

EHE-NE4

A

+

Chicken

Necrotic enteritis

AUS

–

–

[82]

^a

EHE-NE5¹

A

+

Chicken

Necrotic enteritis

AUS

–

–

[82]

^a

EHE-NE7

A

+

Chicken

Necrotic enteritis

AUS

+

2

[82]

PJTC00000000

EHE-NE18¹

A

+

Chicken

Necrotic enteritis

AUS

+

1B

[10]

CP025501

EHE-NE20

A

+

Chicken

Necrotic enteritis

AUS

–

–

[10]

^a

EUR-NE15¹

A

+

Chicken

Necrotic enteritis

AUS

+

1B

[10]

PJTB00000000

F262

A

–

Cow

Bovine abomastis

CAN

+

NP

[11]

AFES0000000

F4969

A

–

Human

non-food-borne diarrhoea

Europe

+

NP

[18]

ABDX0000000

FC1

A

+

Chicken

Necrotic enteritis

USA

–

–

This study

^a

FC2

A

+

Chicken

Necrotic enteritis

USA

+

1B

This study

PJTA00000000

FORC_003

A

–

Human

Food poisoning

SKR

+

NP

FORC

CP009557

FORC_025

A

–

Human

Food poisoning

SKR

+

NP

FORC

CP013101

GNP-1

A

+

Chicken

Necrotic enteritis

USA

+

1A

This study

PJSZ00000000

ITX1105-12MP

A

+

Chicken

Necrotic enteritis

USA

+

1A

This study

PJSY00000000

JGS1495

C

–

Pig

Diarrhoea

–

+

NP

[18]

ABDU0000000

JGS1721

D

–

Sheep

Enteritis

–

+

NP

[18]

ABOO0000000

JGS1987

E

–

Cow

Enteritis

–

+

NP

[18]

ABDW0000000

JGS4143¹

A

+

Chicken

Necrotic enteritis

USA

+

2

[23]

JJC

A

–

Environment

No Disease

MY

+

NP

[18]

AWRZ0000000

JP55

A

–

Horse

Necrotizing enteritis

CAN

+

NP

[83]

CP010993

JP838

A

–

Dog

Necrotizing enteritis

CAN

+

NP

[83]

CP010994

K473

A

–

Chicken

Necrotic enteritis

AUS

+

3

This study

PJSX00000000

Kendall¹

A

+

Chicken

Necrotic enteritis

USA

–

–

This study

^a

Mugdale 5

A

–

Chicken

Healthy

AUS

–

–

[30]

^a

NAG-NE1²

A

–

Chicken

Necrotic enteritis

AUS

+

3

[82]

PJSW00000000

NAG-NE25²

A

–

Chicken

Necrotic enteritis

AUS

+

3

[82]

NAG-NE31¹

A

+

Chicken

Necrotic enteritis

AUS

+

1A

[25]

PJSV00000000

NCTC 8239

A

–

Human

Food poisoning

UK

+

NP

[18]

ABDY0000000

NobL1²

C

–

Chicken

Necrotic enteritis

USA

+

3

This study

PJSU00000000

PBD1²

A

–

Chicken

Healthy

AUS

+

4

[30]

PJST00000000

PBS4

A

–

Chicken

Healthy

AUS

–

–

[30]

^a

PBS5²

A

–

Chicken

Healthy

AUS

+

4

[30]

PJSS00000000

PC5²

A

–

Chicken

Healthy

AUS

+

4

[30]

PJSR00000000

Pennington

A

+

Chicken

Necrotic enteritis

USA

+

1A

This study

PJSQ00000000

SAF-1

A

–

Chicken

Healthy

AUS

+

3

This study

PJSP00000000

SM101

A

–

Human

Food poisoning

UK

+

NP

[14]

CP000312

11²

A

–

Chicken

Healthy

BEL

+

3

[35]

PJSO00000000

13²

A

–

Soil

Gas gangrene

–

+

NP

[66]

BA000016

37¹

A

+

Chicken

Necrotic enteritis

BEL

+

2

[35]

PJSN00000000

48²

A

–

Chicken

Necrotic enteritis

BEL

+

3

[35]

PJTN00000000

67¹

A

+

Chicken

Necrotic enteritis

BEL

+

2

[35]

PJSM00000000

SOM-NE34¹

A

+

Chicken

Necrotic enteritis

AUS

+

2

[25]

PJSL00000000

SOM-NE35¹

A

+

Chicken

Necrotic enteritis

AUS

+

2

[25]

PJTM00000000

TAM-NE38

A

+

Chicken

Necrotic enteritis

AUS

+

1A

This study

PJTL00000000

TAM-NE40

A

+

Chicken

Necrotic enteritis

AUS

+

1A

This study

PJSK00000000

SYD-NE41

A

+

Chicken

Necrotic enteritis

AUS

+

1B

This study

PJUV00000000

TAM-NE42

A

+

Chicken

Necrotic enteritis

AUS

+

3

This study

PJSJ00000000

TAM-NE43

A

+

Chicken

Necrotic enteritis

AUS

+

3

This study

PJTK00000000

TAM-NE46

A

+

Chicken

Necrotic enteritis

AUS

+

1A

This study

PJSI00000000

TAM-NE47

A

+

Chicken

Necrotic enteritis

AUS

–

1A

This study

^a

T3381

A

–

Chicken

Necrotic enteritis

AUS

+

3

This study

PJTJ00000000

UDE 95–6812

A

+

Chicken

Necrotic enteritis

USA

+

1A

This study

PJTI00000000

W1319

A

–

Chicken

Necrotic enteritis

AUS

+

3

This study

PJSH00000000

WAL-14572

A

–

Human

No Disease

–

+

NP

[18]

ADLP0000000

Warren¹

A

+

Chicken

Necrotic enteritis

USA

+

1A

This study

PJTH00000000

WER-NE36¹

A

+

Chicken

Necrotic enteritis

AUS

+

2

[84]

PJTG00000000