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Table 1 Summary of the assembly and annotation of the Sacha Inchi transcriptome

From: De novo transcriptome assembly of the eight major organs of Sacha Inchi (Plukenetia volubilis) and the identification of genes involved in α-linolenic acid metabolism

 

No. of sequences

Assembly

 

 Total number of unigenes

124,750

 Total bases (Mb)

145

 Average unigene length (bp)

851

 N50 (bp)

1909

 Number of unigenes (≥ 500 bp)

54,675

 Number of unigenes (≥ 1 kb)

29,591

Annotation

No. of matched unigenes (percentage)

 Transcript BLASTx against NR

67,832 (54.37%)

 Transcript BLASTx against UniRef90

68,063 (54.56%)

 Transcript BLASTx against TAIR10

42,109 (33.75%)

 Transcript BLASTx against KOG

55,403 (44.41%)

 Transcript BLASTx against SwissProt

43,501 (34.87%)

 All annotated transcripts

70,124 (56.23%)

 Transcripts identified in all five databases

35,381 (28.36%)