Embryonic transcriptome and proteome analyses on hepatic lipid metabolism in chickens divergently selected for abdominal fat content

Table 1 Common DEGs to all five embryonic stages

Gene	Average fold-change (Log2 ratio)^a	GO: Cell component	GO: Molecular function	GO: Biological processes
HSPA9	+ 2.58	mitochondrial matrix	protein binding	cellular protein metabolic process, protein targeting, negative regulation of apoptosis
LOC777109	+ 9.89	membrane, I band	cytoskeletal protein binding	striated muscle cell development
LOC769366	+ 9.30	NA	NA	NA
BAP1	−7.39	PcG protein complex	binding, thiolester hydrolase activity, small conjugating protein-specific protease activity	cell growth, cell cycle, modification-dependent protein catabolic process, cell proliferation
XPO5	−1.72	nuclear lumen	RNA binding	protein targeting, gene silencing
ALDH7A1	−1.40	intracellular membrane-bounded organelle, cytoplasmic part	aldehyde dehydrogenase [NAD(P)+] activity	cellular metabolic process, sensory perception of mechanical stimulus

NA not available. HSPA9 heat shock 70 kDa protein 9, BAP1 BRCA1 associated protein 1, XPO5 exportin 5, ALDH7A1 aldehyde dehydrogenase 7 family member A1
^agene expression fold-changes across the 5 embryonic stages; + and -, up- and down-regulated in the fat line

ISSN: 1471-2164