Skip to main content

Table 3 Percentage of biotype counts in the various bodily fluids

From: Diversity and signature of small RNA in different bodily fluids using next generation sequencing

Biotype Blood Leukocytes Plasma Serum Saliva Cell-Free Saliva Urine Cell-Free Urine
Ave SDEV Ave SDEV Ave SDEV Ave SDEV Ave SDEV Ave SDEV Ave SDEV Ave SDEV
aMillion reads mapped to biotypes 12.8 1.9 2.6 0.1 9.7 6.2 5.4 1.6 1.3 0.8 1.3 0.5 8.0 5.9 8.7 7.6
miRNA 86.6 12.3 29.9 3.3 18.8 14.1 18.1 6.4 12.0 8.3 23.6 7.6 5.3 2.2 6.8 2.9
tRNA 2.1 0.7 18.4 4.0 5.8 2.5 39.7 16.9 46.0 39.2 39.0 11.6 91.3 77.5 91.3 90.3
piRNA 1.9 0.8 5.8 0.9 8.0 5.8 1.9 0.5 0.8 0.4 0.5 0.3 0.3 0.2 0.2 0.2
misc_RNA 7.7 1.5 12.7 2.6 58.0 39.4 35.1 10.3 4.6 2.6 7.1 2.0 1.7 1.7 1.1 0.8
protein_coding 0.4 0.1 5.8 0.6 0.5 0.4 0.6 0.2 6.6 3.9 9.2 7.0 0.4 0.3 0.2 0.1
Mt_rRNA 0.0 0.0 1.9 0.4 0.9 0.7 0.9 0.4 6.8 4.3 2.1 1.8 0.3 0.1 0.0 0.0
Mt_tRNA 0.1 0.0 0.7 0.1 7.7 5.1 3.1 1.3 5.5 2.4 1.2 1.1 0.2 0.1 0.1 0.0
snRNA 0.2 0.0 4.9 0.4 0.0 0.0 0.1 0.1 5.2 5.4 11.9 11.0 0.1 0.1 0.0 0.0
snoRNA 0.3 0.0 8.7 0.8 0.0 0.0 0.1 0.1 4.1 2.6 1.3 1.4 0.1 0.1 0.0 0.0
lincRNA 0.0 0.0 0.7 0.1 0.0 0.0 0.0 0.0 0.7 0.4 0.5 0.3 0.0 0.0 0.0 0.0
Others 0.6 0.1 10.5 1.0 0.2 0.1 0.3 0.1 7.6 4.8 3.7 2.5 0.3 0.2 0.1 0.1
  1. aNumber of million reads mapped to biotypes