Table 3 Percentage of biotype counts in the various bodily fluids
From: Diversity and signature of small RNA in different bodily fluids using next generation sequencing
Biotype | Blood | Leukocytes | Plasma | Serum | Saliva | Cell-Free Saliva | Urine | Cell-Free Urine | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ave | SDEV | Ave | SDEV | Ave | SDEV | Ave | SDEV | Ave | SDEV | Ave | SDEV | Ave | SDEV | Ave | SDEV | |
aMillion reads mapped to biotypes | 12.8 | 1.9 | 2.6 | 0.1 | 9.7 | 6.2 | 5.4 | 1.6 | 1.3 | 0.8 | 1.3 | 0.5 | 8.0 | 5.9 | 8.7 | 7.6 |
miRNA | 86.6 | 12.3 | 29.9 | 3.3 | 18.8 | 14.1 | 18.1 | 6.4 | 12.0 | 8.3 | 23.6 | 7.6 | 5.3 | 2.2 | 6.8 | 2.9 |
tRNA | 2.1 | 0.7 | 18.4 | 4.0 | 5.8 | 2.5 | 39.7 | 16.9 | 46.0 | 39.2 | 39.0 | 11.6 | 91.3 | 77.5 | 91.3 | 90.3 |
piRNA | 1.9 | 0.8 | 5.8 | 0.9 | 8.0 | 5.8 | 1.9 | 0.5 | 0.8 | 0.4 | 0.5 | 0.3 | 0.3 | 0.2 | 0.2 | 0.2 |
misc_RNA | 7.7 | 1.5 | 12.7 | 2.6 | 58.0 | 39.4 | 35.1 | 10.3 | 4.6 | 2.6 | 7.1 | 2.0 | 1.7 | 1.7 | 1.1 | 0.8 |
protein_coding | 0.4 | 0.1 | 5.8 | 0.6 | 0.5 | 0.4 | 0.6 | 0.2 | 6.6 | 3.9 | 9.2 | 7.0 | 0.4 | 0.3 | 0.2 | 0.1 |
Mt_rRNA | 0.0 | 0.0 | 1.9 | 0.4 | 0.9 | 0.7 | 0.9 | 0.4 | 6.8 | 4.3 | 2.1 | 1.8 | 0.3 | 0.1 | 0.0 | 0.0 |
Mt_tRNA | 0.1 | 0.0 | 0.7 | 0.1 | 7.7 | 5.1 | 3.1 | 1.3 | 5.5 | 2.4 | 1.2 | 1.1 | 0.2 | 0.1 | 0.1 | 0.0 |
snRNA | 0.2 | 0.0 | 4.9 | 0.4 | 0.0 | 0.0 | 0.1 | 0.1 | 5.2 | 5.4 | 11.9 | 11.0 | 0.1 | 0.1 | 0.0 | 0.0 |
snoRNA | 0.3 | 0.0 | 8.7 | 0.8 | 0.0 | 0.0 | 0.1 | 0.1 | 4.1 | 2.6 | 1.3 | 1.4 | 0.1 | 0.1 | 0.0 | 0.0 |
lincRNA | 0.0 | 0.0 | 0.7 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.7 | 0.4 | 0.5 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 |
Others | 0.6 | 0.1 | 10.5 | 1.0 | 0.2 | 0.1 | 0.3 | 0.1 | 7.6 | 4.8 | 3.7 | 2.5 | 0.3 | 0.2 | 0.1 | 0.1 |