Table 3 Mean squared error (MSE) of genomic predictions of different models using all deletions and biallelic duplications (173 CNVs)
From: Genomic predictions combining SNP markers and copy number variations in Nellore cattle
Trait | BayesA | BayesA+CNV | BayesB | BayesB+CNV | GBLUP | GBLUP+CNV |
|---|---|---|---|---|---|---|
BW | 0.87 | 0.86 | 0.89 | 0.85 | 0.88 | 0.89 |
CW | 0.10 | 0.14 | 0.11 | 0.12 | 0.12 | 0.12 |
CY | 0.18 | 0.21 | 0.20 | 0.23 | 0.19 | 0.21 |
MW | 0.29 | 0.29 | 0.30 | 0.26 | 0.24 | 0.25 |
MY | 0.28 | 0.32 | 0.26 | 0.22 | 0.27 | 0.22 |
PW | 0.08 | 0.11 | 0.10 | 0.07 | 0.09 | 0.11 |
PWG | 25.76 | 25.45 | 24.32 | 24.49 | 23.76 | 24.38 |
PY | 0.16 | 0.16 | 0.14 | 0.15 | 0.15 | 0.11 |
WG | 18.32 | 20.85 | 20.14 | 20.76 | 14.60 | 16.68 |