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Table 1 Table representing genome size of different plant species and number of MAPKK genes present per genome (species)

From: Comparative analysis of plant MKK gene family reveals novel expansion mechanism of the members and sheds new light on functional conservation

Group

Order

Species

Abbr.

Genome size (Mbs)

Copy number

Database*

Angiosperm

Brassicales

Arabidopsis thaliana

At

135

10

PLAZA

  

Brassica napus

Bn

630

8

NCBI

  

Brassica oleracea

Bo

630

10

Oil Crops Genomics Database

  

Brassica rapa

Br

283.8

14

PLAZA

  

Capsella rubella

Cru

134.8

11

PLAZA

  

Carica papaya

Cp

135

9

PLAZA

  

Thellungiella parvula

Tp

140

9

PLAZA

 

Malvales

Gossypium raimondii

Gr

761.4

11

PLAZA

  

Theobroma cacao

Tc

330.8

8

PLAZA

 

Sapindales

Citrus sinensis

Cs

319

7

PLAZA

 

Myrtales

Eucalyptus grandis

Eg

691

6

PLAZA

 

Malpighiales

Jatropha curcas

Jc

410

10

Jatropha Genome Database

  

Manihot esculenta

Me

760

11

PLAZA

  

Populus trichocarpa

Pt

422.9

11

PLAZA

  

Ricinus communis

Rc

400

6

PLAZA

 

Fabales

Glycine max

Gm

975

14

PLAZA

  

Lotus japonicus

Lj

472

7

PLAZA

  

Medicago truncatula

Mt

257.6

6

PLAZA

  

Phaseolus vulgaris

Pv

521.1

9

Phytozome

 

Cucurbitales

Citrullus lanatus

Cl

425

6

PLAZA

  

Cucumis sativus

Csa

203

6

Cucurbit Genomics Database

  

Cucumis melo

Cm

375

6

PLAZA

 

Rosales

Fragaria vesca

Fv

240

5

PLAZA

  

Malus domestica

Md

881.3

9

PLAZA

  

Prunus persica

Ppe

451.9

10

PLAZA

 

Vitales

Vitis vinifera

Vv

487

5

PLAZA

 

Solanales

Capsicum annuum

Ca

3480

5

Pepper Genome Database

  

Solanum lycopersicum

Sl

900

5

PLAZA

  

Solanum melongena

Sme

1093

4

Eggplant Genome DataBase

  

Solanum tuberosum

St

800

5

PLAZA

 

Ericales

Actinidia chinensis

Ac

616.1

9

Kiwifruit genome sequence

 

Gentianales

Coffea canephora

Cc

710

8

Coffee Genome Hub

 

Caryophyllales

Beta vulgaris

Bv

566.6

5

PLAZA

  

Dianthus caryophyllus

Dc

622

8

Carnation DB

 

Poales

Brachypodium distachyon

Bd

272

12

PLAZA

  

Hordeum vulgare

Hv

5100

6

PLAZA

  

Musa acuminata

Ma

472

9

PLAZA

  

Oryza sativa

Os

372

8

PLAZA

  

Setaria italica

Si

405.7

12

PLAZA

  

Sorghum bicolor

Sb

697.5

7

PLAZA

  

Zea mays

Zm

2500

8

PLAZA

 

Amborellales

Amborella trichopoda

Atr

748

6

PLAZA

Gymnosperm

Coniferales

Picea abies

Pa

1960

7

Spruce genome project

Pteridophyte

Selaginellales

Selaginella moellendorffii

Sm

212.5

3

PLAZA

Bryophyte

Funariales

Physcomitrella patens

Pp

480

7

PLAZA

Algae

Chlamydomonadales

Chlamydomonas reinhardtii

Cr

130

2

PLAZA

  

Volvox carteri

Vc

125.4

1

PLAZA

 

Mamiellales

Micromonas pusilla

Mp

22

2

PLAZA

  

Ostreococcus lucimarinus

Ol

13.2

1

PLAZA

 

Naviculales

Phaeodactylum tricornutum

Pti

27.4

1

PLAZA

 

Laminariales

Saccharina japonica

Sj

537

2

Saccharina Genome Project [72]

Vertebrates

Primates

Homo sapiens

Hs

2996.43

7

UCSC Human Gene

Fugi

Saccharomycetales

Saccharomyces cerevisiae

Sc

12.1249

4

SGD

 

Schizosaccharomycetales

Schizosaccharomyces pombe

Sp

12.5913

3

PomBase

  1. *Database websites: PLAZA, http://bioinformatics.psb.ugent.be/plaza/; NCBI, https://www.ncbi.nlm.nih.gov/; Phytozome, https://phytozome.jgi.doe.gov/pz/; Pepper Genome Database, http://peppersequence.genomics.cn/page/species/index.jsp; Jatropha Genome Database, http://www.kazusa.or.jp/jatropha/; Cucurbit Genomics Database, http://cucurbitgenomics.org/; BRAD, http://brassicadb.org/brad/index.php; Kiwifruit genome Database, http://bioinfo.bti.cornell.edu/cgi-bin/kiwi/home.cgi; Eggplant Genome DataBase, http://eggplant.kazusa.or.jp/; Coffee Genome Hub, http://coffee-genome.org/; Carnation DB, http://carnation.kazusa.or.jp/; Spruce genome project, http://congenie.org/citation; SGD, http://www.yeastgenome.org/; UCSC Human Gene, http://genome.ucsc.edu/; PomBase, http://www.pombase.org/