Fig. 5
LD plot of all used SNPs and indels for association analysis. On the left side and at the top the genes and chromosomes with polymorphic sites are shown. Each coloured square in the below triangle represents the intensity of LD expressed by P-values for each pairwise comparison between polymorphic sites. Each coloured square in the top triangle represents the intensity of LD expressed by r2 for each pairwise comparison between polymorphic sites. On the right side the legend for r2 values and P-values are shown