Table 2 Transcriptional activity of genes and pseudogenes
From: Transcription profiling of butanol producer Clostridium beijerinckii NRRL B-598 using RNA-Seq
Sample | T1 (3.5Â h) | T2 (6Â h) | T3 (8.5Â h) | T4 (13Â h) | T5 (18Â h) | T6 (23Â h) | Total |
|---|---|---|---|---|---|---|---|
No. of genes with RPKM>1a | 5055 (4981) | 5101 (5026) | 5162 (5100) | 5197 (5139) | 5198 (5133) | 5193 (5128) | 5219 (5158) |
No. of pseudogenes with RPKM>1a | 188 (179) | 186 (179) | 190 (184) | 196 (190) | 195 (188) | 194 (187) | 197 (190) |
Max. expression (RPKM) | 4.0∙104 | 3.4∙104 | 3.4∙104 | 3.4∙104 | 3.4∙104 | 4.0∙104 | 4.0∙104 |