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Table 3 Numbers of overlapping windows of elevated diversity and D for different geographic regions

From: Restriction associated DNA-genotyping at multiple spatial scales in Arabidopsis lyrata reveals signatures of pathogen-mediated selection

 

EU-Na

NA-Ob

 

Norway (N = 11)

Sweden (N = 12)

Iceland (N = 12)

(N = 32)

Total windows

13,679

13,650

13,607

14,278

High Tajima’s D and high diversity overlap

173

200

162

415

Number A. lyrata genes in overlap

904

1060

883

2321

Number NLR genes in overlap

12

5

8

33

Number country-specific NLR genes

9

2

5

–

  1. The total number of windows in which Tajima’s D could be estimated (i.e. contained a SNP) is given for each of the Northern European countries (Norway, Sweden, Iceland) and all North American outcrossing samples. The overlap between windows with elevated Tajima’s D (top 5% of all windows) and significantly elevated diversity is also given, as well as the total number of predicted A. lyrata genes and genes annotated as NLR loci in the overlapping high Tajima’s D and high diversity windows. For the Northern European samples, the number of NLR genes identified in overlapping genomic regions in just one country
  2. a Northern European countries, b N. American outcrossing