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Table 3 The most significant 60 k SNPs for umbilical hernia

From: Genome-wide association study reveals a QTL and strong candidate genes for umbilical hernia in pigs on SSC14

Marker name

SSC

Position

MAFa

P-valueb

%varc

INRA0043998

14

50,652,198

0.48

7.43e-05

8.1

ASGA0063261

14

50,672,335

0.48

7.43e-05

8.1

ASGA0063262

14

50,738,530

0.48

7.43e-05

8.1

ALGA0077446

14

50,761,608

0.48

7.43e-05

8.1

ASGA0063267

14

50,776,775

0.48

7.43e-05

8.1

ALGA0077450

14

50,792,395

0.48

7.43e-05

8.1

MARC0024032

14

50,824,208

0.48

7.43e-05

8.1

INRA0044003

14

50,847,851

0.48

7.43e-05

8.1

MARC0112737

14

50,917,403

0.48

7.43e-05

8.1

ALGA0077457

14

50,938,144

0.48

7.43e-05

8.1

ASGA0063274

14

50,964,903

0.48

7.43e-05

8.1

H3GA0040130

14

50,992,818

0.50

7.43e-05

7.9

ASGA0063217

14

49,288,281

0.49

9.21e-05

8.6

  1. aminor allele frequency (MAF)
  2. bthe genomic control corrected p-value
  3. cthe percentage of explained phenotypic variance (%var)