Table 3 Summary of the complete, duplicated, fragmented and missing orthologs inferred from Benchmarking Universal Single-Copy Orthologs (BUSCO) search against the 4584 single-copy orthologs for Actinopterygii
BUSCO statistic | Atlantic salmon | Brown trout | Arctic charr | European whitefish | PhyloFish brown trout | PhyloFish European whitefish | NCBI Atlantic salmon RefSeq Proteins |
|---|---|---|---|---|---|---|---|
Complete BUSCOs | 3461 (79%) | 3596 (78%) | 3589 (78%) | 3512 (76%) | 4254 (92%) | 4202 (91%) | 4476 (97%) |
Complete -single-copy BUSCOs | 1900 (42%) | 1897 (41%) | 1988 (44%) | 1938 (42%) | 2327 (50%) | 2444 (53%) | 1398 (30%) |
Complete - duplicated BUSCOs | 1741 (37%) | 1699 (37%) | 1601 (34%) | 1574 (34%) | 1927 (43%) | 1758 (38%) | 3078 (67%) |
Fragmented BUSCOs | 439 (10%) | 424 (10%) | 431 (10%) | 452 (11%) | 83 (1.8%) | 113 (2.4%) | 80 (1.7%) |
Missing BUSCOs | 504 (10%) | 564 (12%) | 564 (12%) | 620 (13%) | 247 (5.3%) | 269 (5.8%) | 28 (0.6%) |