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Table 5 Prediction results of subcellular localization of the CL317 dataset by selecting different dimensionality reduction methods and different dimensions

From: Prediction of subcellular location of apoptosis proteins by incorporating PsePSSM and DCCA coefficient based on LFDA dimensionality reduction

  Dimensions
Algorithms Jackknife test (%)
10 20 30 40 50 60 70 80 90 100
PCA 79.5 84.9 89.0 89.3 87.7 86.1 85.8 83.9 82.6 80.4
Laplacian 63.4 73.8 79.2 82.6 84.9 84.5 82.3 80.8 78.5 74.4
AKPCA 78.2 84.5 87.7 89.0 89.6 88.6 87.4 88.3 86.8 86.4
LFDA 99.7 98.7 98.7 98.4 98.4 97.8 97.5 97.5 97.2 97.2