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Table 6 Prediction results of subcellular localization of the ZW225 dataset by selecting different dimensionality reduction methods and different dimensions

From: Prediction of subcellular location of apoptosis proteins by incorporating PsePSSM and DCCA coefficient based on LFDA dimensionality reduction

  Dimensions
Algorithms Jackknife test (%)
10 20 30 40 50 60 70 80 90 100
PCA 74.2 79.1 85.8 84.9 83.6 81.3 78.7 78.2 77.8 74.7
Laplacian 69.3 80.0 82.2 80.9 82.2 77.8 73.8 72.0 68.0 67.1
AKPCA 74.7 82.2 84.0 86.2 84.9 83.1 80.9 80.9 77.3 78.2
LFDA 99.6 99.6 99.6 99.6 99.6 99.6 99.6 99.6 99.1 99.1