Fig. 5
From: Limitations of alignment-free tools in total RNA-seq quantification
Pipeline performances of differential expression measurements for different gene types. a Root mean square error (RMSE) values between measured and expected log2 fold-change values for each gene type. Bars indicate RMSE values for different gene types from each pipeline and are color-coded by pipelines. b Cumulative absolute errors in tRNA log2 fold-change predictions. tRNAs (x-axis) were ordered ascendingly by the absolute errors in log2 fold-change predictions for each pipeline. Cumulative absolute errors for all detected tRNAs are plotted. Lines are color-coded by pipelines