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Table 4 Six pathways significantly associated with beak deformity

From: Single SNP- and pathway-based genome-wide association studies for beak deformity in chickens using high-density 600K SNP arrays

Pathway ID

Definition

PEMP-value

Ratio

gga03010

Ribosome

9.90E-03

194/1431 (13.6%)

gga04114

Oocyte meiosis

1.98E-02

98/433 (22.6%)

gga00770

Pantothenate and CoA biosynthesis

1.98E-02

32/95 (33.7%)

gga00620

Pyruvate metabolism

2.97E-02

63/231 (27.3%)

gga00260

Glycine, serine and threonine metabolism

3.96E-02

71/366 (19.4%)

gga04020

Calcium signaling pathway

4.95E-02

519/4106 (12.6%)