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Table 1 List of genes regulated by both nitrogen and phosphate starvation in rice roots and shoots

From: Transcriptomic analyses of rice (Oryza sativa) genes and non-coding RNAs under nitrogen starvation using multiple omics technologies

Gene ID

Description

Fold Change (log2)

Root_1d

 

-N_1d / -N_0d

-Pi_1d / +Pi_1h

 Os03g0150800

PT2

−1.68

1.67

Root_3d

 

-N_3d / -N_0d

-Pi_3d / +Pi_1h

 Os01g0748950

OsPTR04

−3.58

−2.22

 Os03g0641200

OsCAT3

1.44

1.52

 Os06g0569500

Similar to Ent-kaurene oxidase 1

1.60

2.18

 Os10g0172100

Similar to Cytochrome P450 family protein, expressed

3.23

5.26

Root_7d

 

-N_7d / -N_0d

-Pi_7d / +Pi_1h

 Os02g0620500

AMT1.2

3.34

−14.40

 Os02g0620600

AMT1.3

−1.92

−2.37

 Os02g0550800

AMT3.3

2.63

2.42

 Os01g0882800

OsAAP8

1.75

1.56

 Os01g0825800

OsATL7

−3.52

−1.81

 Os01g0871500

OsPTR07

−1.23

−1.38

 Os01g0871600

OsPTR08

−2.91

−5.09

 Os01g0902700

OsPTR17

3.92

3.53

 Os03g0223400

GS1.2

−2.11

−1.78

 Os01g0682001

GOGAT1(NADH)

−1.29

−2.42

 Os03g0291500

ASNS1

−2.24

−1.38

 Os02g0202200

SPX2

1.39

4.11

 Os03g0146800

IPS1

−4.40

12.09

 Os01g0719300

Similar to Sulfate transporter 3.1

1.79

2.01

 Os03g0195450

Similar to sulfate/bicarbonate/oxalate

exchanger and transporter sat-1

−1.65

−1.15

 Os02g0776400

Similar to nuclear transcription factor Y subunit A-3

1.19

1.37

 Os07g0608200

NF-YA6

1.30

1.58

 Os01g0187600

OsCKX1

1.41

1.03

 Os01g0940000

OsCKX4

1.16

1.86

Shoot_1d

 

-N_1d / -N_0d

-Pi_1d / +Pi_1h

 Os04g0524500

OsOPT09

1.43

−1.39

 Os03g0291500

ASNS1

−2.14

−2.07

Shoot_3d

 

-N_3d / -N_0d

-Pi_3d / +Pi_1h

 Os02g0809800

PHO1;2

1.94

1.11

 Os02g0578400

PsbQ family protein

−1.37

−2.36

 Os08g0191900

Pentatricopeptide repeat domain containing protein

−1.30

−2.33

Shoot_7d

 

-N_7d / -N_0d

-Pi_7d / +Pi_1h

 Os01g0547600

NRT2.4

1.88

1.39

 Os02g0102200

OsAAP9

1.17

1.09

 Os06g0228500

OsATL12

2.30

1.89

 Os03g0406100

SPX5

−2.77

3.61

 Os04g0186400

PT4

1.40

2.60

 Os06g0493600

PHO1;3

−1.38

1.61

 Os03g0146800

IPS1

1.28

4.76

 Os01g0194600

Thioredoxin fold domain containing protein (OsGrx_A2)

1.27

1.25

 Os05g0198200

Thioredoxin fold domain containing protein (OsGrx_C15)

1.02

1.48

 Os10g0482900

Thioredoxin fold domain containing protein

2.11

1.07

 Os03g0288000

Similar to Metallothionein

3.21

2.46

 Os05g0202800

Similar to Metallothionein-like protein 3B

2.95

1.31