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Fig. 5 | BMC Genomics

Fig. 5

From: Analysis of Brachypodium miRNA targets: evidence for diverse control during stress and conservation in bioenergy crops

Fig. 5

Characterization of stress associated miRNA target sites using RNAseq. For each stress condition, target sites passing all three filters of the previous pipeline were characterized based on change in PARE abundance and change in overall transcript level as observed in RNAseq. “Direct” target sites exhibited changes in PARE under stress conditions which occurred in the same direction as changes in overall transcript level. The “Unchanged” group consisted of target sites within transcripts which despite changes in PARE did not exhibit changes in transcript level. Lastly, the “Inverse” group exhibited changes in PARE under stress that occurred in the opposite direction of changes observed in RNAseq

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