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Table 3 Top20 genes selected by the early merging strategy (first three columns) and late merging approach (last three columns) in group 1 (neurological tissues)

From: Gene expression profiles in neurological tissues during West Nile virus infection: a critical meta-analysis

Gene Symbol t-statistic logFC (range) Gene Symbol t-statistic logFC (range)
Rsad2* 41.074 5.93 − 7.72 Cd274* 14.794 5.11 − 6.34
Cxcl10* 36.524 6.30 − 8.36 Casp4 14.550 1.46 − 5.62
Cd274* 35.208 5.11 − 6.34 Ccl7 14.524 1.47 − 6.37
Ifi47 34.309 4.33 − 5.78 Samd9l* 14.360 2.83 − 4.28
Oasl2* 34.289 4.57 − 6.31 Rsad2* 14.281 5.93 − 7.72
H2-M3* 34.156 2.69 − 3.52 H2-M3* 14.113 2.69 − 3.52
Igtp 33.100 4.67 − 6.34 Cxcl10* 14.091 6.30 − 8.36
Usp18 33.080 4.46 − 6.25 Ifi207 13.920 3.54 − 4.77
Trim30a 32.723 4.18 − 5.44 Trim25* 13.915 2.40 − 3.19
Gbp3 32.571 3.76 − 5.34 Ccl3 13.882 3.54 − 6.74
Trim25* 32.195 2.40 − 3.19 Trim21* 13.863 2.88 − 3.75
Serpina3g 31.434 4.55 − 5.53 Cfb 13.846 2.32 − 6.12
Ifit3 30.856 4.17 − 6.23 Isg20 13.840 1.58 − 4.35
B2m 30.582 2.37 − 3.62 Ifi27l2a 13.821 1.58 − 6.44
Batf2 30.384 3.13 − 4.17 Irgm1 13.757 3.57 − 5.34
Phf11d 30.049 3.61 − 5.72 Rtp4 13.751 1.92 − 4.38
Tlr2 29.989 3.40 − 4.69 Irf1 13.697 2.53 − 4.13
Trim21* 29.758 2.88 − 3.75 Oasl2* 13.677 4.57 − 6.31
Samd9l* 28.802 2.83 − 4.28 Rgs1 13.610 2.77 − 5.48
Ifit2 28.146 4.28 − 5.95 AA467197 13.595 4.46 − 6.30
  1. Gene were ranked by their t-statistic since the permutation p-values did not provide sufficient precision. For each ranked list the range of logFCs of the individual studies are given. Eight genes, flagged by *, occurred in both lists