Fig. 3
From: An improved approach for reconstructing consensus repeats from short sequence reads
Comparison of the fully constructed repeats in Repbase for the two version of REPdenovo. Bullet circles: hit Repbase repeats constructed by both versions of REPdenovo. Empty circles: hit Repbase repeats constructed only by the new version. Figure in the right-up corner is zoomed in the red rectangle region. There are 154(out of all the 220) bullet circles and 57 empty circles. Most of these 57 ones fall in higher divergent and lower copy number regions (the regions of blue rectangles)