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Fig. 2 | BMC Genomics

Fig. 2

From: A comparison of heat-stress transcriptome changes between wild-type Arabidopsis pollen and a heat-sensitive mutant harboring a knockout of cyclic nucleotide-gated cation channel 16 (cngc16)

Fig. 2

HS-dependent changes for 25 Ca2+-signaling related genes. Graph shows selected examples of HS-dependent log2-fold abundance changes for transcript encoded by 25 genes related to Ca2+-signaling. The 25 examples were selected as the most statistically significant changes in WT pollen (open bar) based on adjusted p-values. Corresponding transcript abundances from cngc16 mutant (grey bar) and aerial parts of seedlings (black bar) are shown for comparison. HS-dependent changes in transcript abundance in seedlings (aerial parts) was based on [33]. Complete list of Ca2+-related genes with putative functions (total 230) is provided in Additional file 12. CHXs are cation/H+-exchangers. CBLDs are Ca2+-dependent lipid-binding (CaLB domain) family protein. SLP is Calcineurin-like metallo-phosphoesterase superfamily protein. CRTs are calreticulins. ACA is autoinhibited Ca2+-ATPase pump. CAMs are calmodulins. CML is calmodulin like. CNGC is cyclic nucleotide gated channel. CPKs are Ca2+-dependent protein kinases. CBN is Ca2+-binding endonuclease/exonuclease/phosphatase family. CBL is calcineurin B subunit-like protein. CIPK is calcineurin B-like (CBL)-interacting protein kinase. CAX is cation exchanger. * indicates absence of probeset in microarray experiment

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BMC Genomics

ISSN: 1471-2164

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