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Fig. 5 | BMC Genomics

Fig. 5

From: RNA-seq assistant: machine learning based methods to identify more transcriptional regulated genes

Fig. 5

Histone acetylation patterns in predicted genes. a and b Boxplot showing the correlation of peak breadths and ethylene up-regulated genes (U, n = 360) or ethylene down-regulated genes (D, n = 1508) in a Col-0 or b ein2–5 under air and ethylene treatment. The ** indicates P < 0.001 by t-test. c and d Boxplot showing the histone mark enrichment (RPKM) in 1000 bp around TSSs in ethylene up-regulated genes (U, n = 360) and ethylene down-regulated genes (D, n = 1508) in c Col-0 or d ein2–5 in air and ethylene. The ** indicates P < 0.001 by t-test

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