Table 1 Comparison of de novo genome assembly methods
| Â | Hybrid Assembly | Spades Assembly |
|---|---|---|
Assembly vs. reference statistics | ||
 Genome fraction (%) | 98.62 | 92.54 |
 Duplication ratio | 3.85 | 1.60 |
 Genes covered | 170 + 0 partial | 144 + 24 partial |
 Largest alignment | 175,612 | 13,936 |
 Total aligned length | 900,508 | 350,687 |
 NG50 | 230,347 | 9304 |
 NG75 | 230,347 | 6488 |
Statistics without reference | ||
 Contigs | 37 | 127 |
 Largest contig | 230,347 | 17,689 |
 Total length | 985,159 | 452,509 |
 N50 | 41,056 | 5686 |
 N75 | 22,636 | 3766 |
 GC (%) | 57 | 57 |