TY - JOUR AU - Kolaczkowska, E. AU - Kubes, P. PY - 2013 DA - 2013// TI - Neutrophil recruitment and function in health and inflammation JO - Nat. Rev. Immunol. VL - 13 UR - https://doi.org/10.1038/nri3399 DO - 10.1038/nri3399 ID - Kolaczkowska2013 ER - TY - JOUR AU - Rappel, W. J. AU - Loomis, W. F. PY - 2009 DA - 2009// TI - Eukaryotic chemotaxis JO - Wiley Interdiscip Rev Syst Biol Med VL - 1 UR - https://doi.org/10.1002/wsbm.28 DO - 10.1002/wsbm.28 ID - Rappel2009 ER - TY - JOUR AU - Mantovani, A. AU - Cassatella, M. A. AU - Costantini, C. AU - Jaillon, S. PY - 2011 DA - 2011// TI - Neutrophils in the activation and regulation of innate and adaptive immunity JO - Nat Rev Immunol VL - 11 UR - https://doi.org/10.1038/nri3024 DO - 10.1038/nri3024 ID - Mantovani2011 ER - TY - JOUR AU - Collins, S. J. AU - Gallo, R. C. AU - Gallagher, R. E. PY - 1977 DA - 1977// TI - Continuous growth and differentiation of human myeloid leukaemic cells in suspension culture JO - Nature VL - 270 UR - https://doi.org/10.1038/270347a0 DO - 10.1038/270347a0 ID - Collins1977 ER - TY - STD TI - Gupta D, Shah HP, Malu K, Berliner N, Gaines P, Gupta D, et al. Differentiation and Characterization of Myeloid Cells. Curr. Protoc. Immunol. Hoboken, Wiley; 2014. p. 22F.5.1-22F.5.28 ID - ref5 ER - TY - JOUR AU - Collins, S. J. AU - Ruscetti, F. W. AU - Gallagher, R. E. AU - Gallo, R. C. PY - 1978 DA - 1978// TI - Terminal differentiation of human promyelocytic leukemia cells induced by dimethyl sulfoxide and other polar compounds JO - Proc Natl Acad Sci U S A VL - 75 UR - https://doi.org/10.1073/pnas.75.5.2458 DO - 10.1073/pnas.75.5.2458 ID - Collins1978 ER - TY - JOUR AU - Hauert, A. B. AU - Martinelli, S. AU - Marone, C. AU - Niggli, V. PY - 2002 DA - 2002// TI - Differentiated HL-60 cells are a valid model system for the analysis of human neutrophil migration and chemotaxis JO - Int J Biochem Cell Biol VL - 34 UR - https://doi.org/10.1016/S1357-2725(02)00010-9 DO - 10.1016/S1357-2725(02)00010-9 ID - Hauert2002 ER - TY - JOUR AU - Fleck, R. A. AU - Romero-Steiner, S. AU - Nahm, M. H. PY - 2005 DA - 2005// TI - Use of HL-60 cell line to measure opsonic capacity of pneumococcal antibodies JO - Clin Vaccine Immunol VL - 12 UR - https://doi.org/10.1128/CDLI.12.1.19-27.2005 DO - 10.1128/CDLI.12.1.19-27.2005 ID - Fleck2005 ER - TY - JOUR AU - Skoge, M. AU - Wong, E. AU - Hamza, B. AU - Bae, A. AU - Martel, J. AU - Kataria, R. PY - 2016 DA - 2016// TI - A worldwide competition to compare the speed and chemotactic accuracy of neutrophil-like cells JO - PLoS One VL - 11 UR - https://doi.org/10.1371/journal.pone.0154491 DO - 10.1371/journal.pone.0154491 ID - Skoge2016 ER - TY - JOUR AU - Birnie, G. D. PY - 1988 DA - 1988// TI - The HL60 cell line: a model system for studying human myeloid cell differentiation JO - Br J Cancer Suppl VL - 9 ID - Birnie1988 ER - TY - JOUR AU - Tucker, K. A. AU - Lilly, M. B. AU - Heck, L. AU - Rado, T. A. PY - 1987 DA - 1987// TI - Characterization of a new human diploid myeloid leukemia cell line (PLB-985) with granulocytic and monocytic differentiating capacity JO - Blood VL - 70 ID - Tucker1987 ER - TY - JOUR AU - Drexler, H. G. AU - Dirks, W. G. AU - Matsuo, Y. AU - MacLeod, R. A. F. PY - 2003 DA - 2003// TI - False leukemia–lymphoma cell lines: an update on over 500 cell lines JO - Leukemia VL - 17 UR - https://doi.org/10.1038/sj.leu.2402799 DO - 10.1038/sj.leu.2402799 ID - Drexler2003 ER - TY - JOUR AU - Ashkenazi, A. AU - Marks, R. S. PY - 2009 DA - 2009// TI - Luminol-dependent chemiluminescence of human phagocyte cell lines: comparison between DMSO differentiated PLB 985 and HL 60 cells JO - Luminescence VL - 24 UR - https://doi.org/10.1002/bio.1091 DO - 10.1002/bio.1091 ID - Ashkenazi2009 ER - TY - JOUR AU - Yang, H. W. AU - Collins, S. R. AU - Meyer, T. PY - 2015 DA - 2015// TI - Locally excitable Cdc42 signals steer cells during chemotaxis JO - Nat Cell Biol VL - 18 UR - https://doi.org/10.1038/ncb3292 DO - 10.1038/ncb3292 ID - Yang2015 ER - TY - JOUR AU - Servant, G. AU - Weiner, O. D. AU - Neptune, E. R. AU - Sedat, J. W. AU - Bourne, H. R. PY - 1999 DA - 1999// TI - Dynamics of a chemoattractant receptor in living neutrophils during chemotaxis JO - Mol Biol Cell VL - 10 UR - https://doi.org/10.1091/mbc.10.4.1163 DO - 10.1091/mbc.10.4.1163 ID - Servant1999 ER - TY - JOUR AU - Majumdar, R. AU - Tavakoli Tameh, A. AU - Parent, C. A. PY - 2016 DA - 2016// TI - Exosomes mediate LTB4 release during neutrophil chemotaxis JO - PLoS Biol VL - 14 UR - https://doi.org/10.1371/journal.pbio.1002336 DO - 10.1371/journal.pbio.1002336 ID - Majumdar2016 ER - TY - JOUR AU - Yaseen, R. AU - Blodkamp, S. AU - Lüthje, P. AU - Reuner, F. AU - Völlger, L. AU - Naim, H. Y. PY - 2017 DA - 2017// TI - Antimicrobial activity of HL-60 cells compared to primary blood-derived neutrophils against Staphylococcus aureus JO - J. Negat. Results Biomed VL - 16 UR - https://doi.org/10.1186/s12952-017-0067-2 DO - 10.1186/s12952-017-0067-2 ID - Yaseen2017 ER - TY - JOUR AU - Collins, S. J. PY - 1987 DA - 1987// TI - The HL-60 promyelocytic leukemia cell line: proliferation, differentiation, and cellular oncogene expression JO - Blood VL - 70 ID - Collins1987 ER - TY - STD TI - Friend C, Scher W, Holland JG, T Sato. Hemoglobin synthesis in murine virus-induced leukemic cells in vitro: stimulation of erythroid differentiation by dimethyl sulfoxide. Proc Natl Acad Sci. 1971;68:378–82. ID - ref19 ER - TY - JOUR AU - Siebenlist, U. AU - Bressler, P. AU - Kelly, K. PY - 1988 DA - 1988// TI - Two distinct mechanisms of transcriptional control operate on c-myc during differentiation of HL60 cells JO - Mol Cell Biol VL - 8 UR - https://doi.org/10.1128/MCB.8.2.867 DO - 10.1128/MCB.8.2.867 ID - Siebenlist1988 ER - TY - JOUR AU - Jorgenson, K. F. AU - Antoun, G. R. AU - Zipf, T. F. PY - 1991 DA - 1991// TI - Chromatin structural analysis of the 5′ end and contiguous flanking region of the myeloperoxidase gene JO - Blood VL - 77 ID - Jorgenson1991 ER - TY - STD TI - Veselska R, Zitterbart K, Auer J, Neradil J. Differentiation of HL-60 myeloid leukemia cells induced by all-trans retinoic acid is enhanced in combination with caffeic acid. Int J Mol Med. 2004;14:305–10. ID - ref22 ER - TY - JOUR AU - Pedruzzi, E. AU - Fay, M. AU - Elbim, C. AU - Gaudry, M. AU - Gougerot-Pocidalo, M. A. PY - 2002 DA - 2002// TI - Differentiation of PLB-985 myeloid cells into mature neutrophils, shown by degranulation of terminally differentiated compartments in response to N-formyl peptide and priming of superoxide anion production by granulocyte-macrophage colony-stimulating fact JO - Br J Haematol VL - 117 UR - https://doi.org/10.1046/j.1365-2141.2002.03521.x DO - 10.1046/j.1365-2141.2002.03521.x ID - Pedruzzi2002 ER - TY - JOUR AU - Nakajima, H. AU - Ihle, J. N. PY - 2001 DA - 2001// TI - Granulocyte colony-stimulating factor regulates myeloid differentiation through CCAAT/enhancer-binding protein epsilon JO - Blood VL - 98 UR - https://doi.org/10.1182/blood.V98.4.897 DO - 10.1182/blood.V98.4.897 ID - Nakajima2001 ER - TY - JOUR AU - Collins, S. R. AU - Yang, H. W. AU - Bonger, K. M. AU - Guignet, E. G. AU - Wandless, T. J. AU - Meyer, T. PY - 2015 DA - 2015// TI - Using light to shape chemical gradients for parallel and automated analysis of chemotaxis JO - Mol Syst Biol VL - 11 UR - https://doi.org/10.15252/msb.20156027 DO - 10.15252/msb.20156027 ID - Collins2015 ER - TY - JOUR AU - Marin-Esteban, V. AU - Turbica, I. AU - Dufour, G. AU - Semiramoth, N. AU - Gleizes, A. AU - Gorges, R. PY - 2012 DA - 2012// TI - Afa/Dr diffusely adhering Escherichia coli strain C1845 induces neutrophil extracellular traps that kill bacteria and damage human enterocyte-like cells JO - Infect Immun VL - 80 UR - https://doi.org/10.1128/IAI.00050-12 DO - 10.1128/IAI.00050-12 ID - Marin-Esteban2012 ER - TY - JOUR AU - Chang, H. H. AU - Oh, P. Y. AU - Ingber, D. E. AU - Huang, S. PY - 2006 DA - 2006// TI - Multistable and multistep dynamics in neutrophil differentiation JO - BMC Cell Biol VL - 7 UR - https://doi.org/10.1186/1471-2121-7-11 DO - 10.1186/1471-2121-7-11 ID - Chang2006 ER - TY - JOUR AU - Le Cabec, V. AU - Calafat, J. AU - Borregaard, N. PY - 1997 DA - 1997// TI - Sorting of the specific granule protein, NGAL, during granulocytic maturation of HL-60 cells JO - Blood VL - 89 ID - Le Cabec1997 ER - TY - JOUR AU - Meyer, P. A. AU - Kleinschnitz, C. PY - 1990 DA - 1990// TI - Retinoic Acid Induced Differentiation and Commitment in HL-60 Cells JO - Environ Health Perspect. VL - 88 UR - https://doi.org/10.1289/ehp.9088179 DO - 10.1289/ehp.9088179 ID - Meyer1990 ER - TY - JOUR AU - Yu, L. AU - Zhen, L. AU - Dinauer, M. C. PY - 1997 DA - 1997// TI - Biosynthesis of the phagocyte NADPH oxidase cytochrome b 558 JO - J Biol Chem VL - 272 UR - https://doi.org/10.1074/jbc.272.43.27288 DO - 10.1074/jbc.272.43.27288 ID - Yu1997 ER - TY - JOUR AU - Bunce, C. M. AU - French, P. J. AU - Durham, J. AU - Stockley, R. A. AU - Michell, R. H. AU - Brown, G. PY - 1994 DA - 1994// TI - Indomethacin potentiates the induction of HL60 differentiation to neutrophils, by retinoic acid and granulocyte colony-stimulating factor, and to monocytes, by vitamin D3 JO - Leukemia VL - 8 ID - Bunce1994 ER - TY - JOUR AU - Fleck, R. A. AU - Athwal, H. AU - Bygraves, J. A. AU - Hockley, D. J. AU - Feavers, I. M. AU - Stacey, G. N. PY - 2003 DA - 2003// TI - Optimization of nb-4 and hl-60 differentiation for use in opsonophagocytosis assays JO - In Vitro Cell Dev Biol Anim VL - 39 UR - https://doi.org/2.0.CO;2 DO - 2.0.CO;2 ID - Fleck2003 ER - TY - JOUR AU - Huang, S. AU - Eichler, G. AU - Bar-Yam, Y. AU - Ingber, D. E. PY - 2005 DA - 2005// TI - Cell fates as high-dimensional attractor states of a complex gene regulatory network JO - Phys Rev Lett VL - 94 ID - Huang2005 ER - TY - JOUR AU - Jiang, K. AU - Zhu, L. AU - Buck, M. J. AU - Chen, Y. AU - Carrier, B. AU - Liu, T. PY - 2015 DA - 2015// TI - Disease-associated single-nucleotide polymorphisms from noncoding regions in juvenile idiopathic arthritis are located within or adjacent to functional genomic elements of human neutrophils and CD4+ T cells JO - Arthritis Rheumatol VL - 67 UR - https://doi.org/10.1002/art.39135 DO - 10.1002/art.39135 ID - Jiang2015 ER - TY - STD TI - Wright HL, Thomas HB, Moots RJ, Edwards SW. RNA-Seq reveals activation of both common and cytokine-specific pathways following neutrophil priming. PLoS One. 2013;8:e58598. ID - ref35 ER - TY - JOUR AU - Thomas, H. B. AU - Moots, R. J. AU - Edwards, S. W. AU - Wright, H. L. PY - 2015 DA - 2015// TI - Whose gene is it anyway? The effect of preparation purity on neutrophil transcriptome studies JO - PLoS One VL - 10 ID - Thomas2015 ER - TY - JOUR AU - Cusanovich, D. A. AU - Daza, R. AU - Adey, A. AU - Pliner, H. A. AU - Christiansen, L. AU - Gunderson, K. L. PY - 2015 DA - 2015// TI - Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing JO - Science VL - 348 UR - https://doi.org/10.1126/science.aab1601 DO - 10.1126/science.aab1601 ID - Cusanovich2015 ER - TY - JOUR AU - Taylor, A. AU - Tang, W. AU - Bruscia, E. M. AU - Zhang, P. X. AU - Lin, A. AU - Gaines, P. PY - 2014 DA - 2014// TI - SRF is required for neutrophil migration in response to inflammation JO - Blood VL - 123 UR - https://doi.org/10.1182/blood-2013-06-507582 DO - 10.1182/blood-2013-06-507582 ID - Taylor2014 ER - TY - JOUR AU - Coffelt, S. B. AU - Kersten, K. AU - Doornebal, C. W. AU - Weiden, J. AU - Vrijland, K. AU - Hau, C. -. S. PY - 2015 DA - 2015// TI - IL-17-producing γδ T cells and neutrophils conspire to promote breast cancer metastasis JO - Nature VL - 522 UR - https://doi.org/10.1038/nature14282 DO - 10.1038/nature14282 ID - Coffelt2015 ER - TY - STD TI - NCBI Resource Coordinators. Database resources of the National Center for biotechnology information. Nucleic Acids Res. 2017;45:D12–7. ID - ref40 ER - TY - JOUR AU - Huang, D. W. AU - Sherman, B. T. AU - Lempicki, R. A. PY - 2008 DA - 2008// TI - Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources JO - Nat Protoc VL - 4 UR - https://doi.org/10.1038/nprot.2008.211 DO - 10.1038/nprot.2008.211 ID - Huang2008 ER - TY - STD TI - Van der Auwera GA, Carneiro MO, Hartl C, Poplin R, del Angel G, Levy-Moonshine A, et al. From FastQ Data to High-Confidence Variant Calls: The Genome Analysis Toolkit Best Practices Pipeline. Curr. Protoc. Bioinforma. Hoboken, NJ, USA: John Wiley & Sons, Inc.; 2013. p. 11.10.1–11.10.33. ID - ref42 ER - TY - JOUR AU - Dobin, A. AU - Davis, C. A. AU - Schlesinger, F. AU - Drenkow, J. AU - Zaleski, C. AU - Jha, S. PY - 2013 DA - 2013// TI - STAR: Ultrafast universal RNA-seq aligner JO - Bioinformatics VL - 29 UR - https://doi.org/10.1093/bioinformatics/bts635 DO - 10.1093/bioinformatics/bts635 ID - Dobin2013 ER - TY - STD TI - Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, et al. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol. 2010;28:511–5. ID - ref44 ER - TY - STD TI - Glusman G, Caballero J, Robinson M, Kutlu B, Hood L. Optimal Scaling of Digital Transcriptomes. PLoS One. 2013;8:e77885. ID - ref45 ER -