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Table 1 Identification of Differentially Expressed Genes (DEGs)

From: Comparative transcriptome analysis of the interaction between Actinidia chinensis var. chinensis and Pseudomonas syringae pv. actinidiae in absence and presence of acibenzolar-S-methyl

  Comparison Total DEGs Up regulated Down regulated
DEGs associated with the infection process HC_vs_I3 2747 1596 1151
HC_vs_I24 272 116 156
HC_vs_I48 341 81 260
DEGs associated with acibenzolar-S-methyl treatment HC_vs_ASM 819 474 345
DEGs associated with infection in acibenzolar-S-methyl treated plants I3_vs_ASM.I3 510 323 187
I24_vs_ASM.I24 1374 552 822
I48_vs_ASM.I48 1252 747 505
  1. HC was healthy control plants; I3, I24, I48 were inoculated plants at 3, 24 and 48 h post-inoculation; ASM represented acibenzolar-S-methyltreated healthy plants; ASM.I3, ASM.I24, ASM.I48 were acibenzolar-S-methyltreated plant inoculated at 3, 24 and 48 h post-inoculation (hpi)