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Table 2 Genetic diversity measurements for nine sub-populations from three chicken breeds

From: Genomic diversity dynamics in conserved chicken populations are revealed by genome-wide SNPs

Population Ho He PN (%) AR F ES a F ROH b
BEC07 0.2250 0.2195 82.41 1.225 0.0567 0.0500
BEC10 0.2281 0.2208 81.64 1.228 0.0748 0.0481
BEC15 0.2211 0.2073 76.06 1.221 0.1043 0.0553
BEC average 0.2247 0.2159 80.04 1.225 0.0789 0.0511
BYC07 0.2223 0.2173 80.95 1.222 0.1820 0.0698
BYC10 0.2189 0.2091 79.11 1.219 0.1978 0.0613
BYC15 0.2095 0.2091 75.83 1.210 0.2233 0.0925
BYC average 0.2169 0.2118 78.63 1.217 0.2010 0.0745
LSC10 0.2290 0.2197 80.55 1.229 0.0748 0.0474
LSC12 0.2376 0.2273 81.70 1.238 0.0867 0.0461
LSC15 0.2379 0.2281 81.66 1.238 0.1043 0.0606
LSC average 0.2348 0.2250 81.30 1.235 0.0886 0.0514
  1. He Expected heterozygosity, Ho Observed heterozygosity, PN Proportion of polymorphic SNPs, AR Allelic richness, FES a, inbreeding coefficient based on pedigree; FROH b, inbreeding coefficient based on runs of homozygosity