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Table 2 S. lugdunensis complete prophages and identification of putative barriers to HGT

From: Comparative genomic analysis of Staphylococcus lugdunensis shows a closed pan-genome and multiple barriers to horizontal gene transfer

Strain

Complete Prophage

Length (kb)

GC%

Total Proteins

Common Phage

Peptidases

T/AT1

RM2

CRISPR/Cas Systems

HKU0901

1

37.7

34.57

58

PHAGE_Staphy_PH153

0

0

0

0

N920143

1

49.4

34.42

63

PHAGE_Staphy_TEM1234

Zn2+ carboxy peptidase

0

0

0

FDAARGOS_143

1

57.0

35.24

55

PHAGE_Staphy_CNPx_NC_0312415

0

0

0

 

VISLISI_22

1

49.4

34.3

53

PHAGE_Staphy_StB126

Zn2+ carboxy peptidase

0

0

cas2

VISLISI_33

1

44.4

33.8

52

PHAGE_Staphy_StB12

Zn2+ carboxy peptidase

0

0

0

1

28.1

34.4

52

PHAGE_Staphy_PH15

0

0

0

0

VISLISI_37

1

47.0

34.35

58

PHAGE_Staphy_StB12

Zn2+ carboxy peptidase

0

0

0

  1. 1 T/AT systems
  2. 2 RM systems
  3. 3 PHAGE_Staphy_PH15: S. epidermidis phage
  4. 4 PHAGE_Staphy_TEM123: S. aureus phage
  5. 5 PHAGE_Staphy_CNPx_NC_031241: S. epidermidis phage
  6. 6 PHAGE_Staphy_StB12: S. hominis phage