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Fig. 2 | BMC Genomics

Fig. 2

From: DoGFinder: a software for the discovery and quantification of readthrough transcripts from RNA-seq

Fig. 2

DoGFinder discovers readthrough induction following hypoxia in human cells. DoGFinder run on RNA-seq data of HPMECs before and after hypoxia stress (GEO accession GSE53510), with various initial parameter settings, show that hypoxia generates a larger number of DoGs (a) which are also getting longer (b). Bars represent means and error bars of DoGFinder runs on 2 or 3 replicates from control or hypoxia-treated cells, respectively (a), and over all DoG lengths (b), for various initial parameter settings

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