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Table 6 The list of divergent SNP loci for Apis mellifera scutellata using FST outlier and environmental correlation tests

From: Population genomics and morphometric assignment of western honey bees (Apis mellifera L.) in the Republic of South Africa

No. SNP loci SNP Position Heterozygosity FST statistic Environmental correlation
1 S1_22,206,418 22,206,418 0.21 0.1  
2 S1_39180699 9,287,191 0.1 0.17  
3 S1_75314820 3,919,070 0.17 0.08  
4 S1_88966222 3,207,100 0.48 0.1 Latitude
5 S1_89371176 3,612,054 0.3 0.11  
6 S1_90412686 4,653,564 0.13 0.12  
7 S1_90545383 4,786,261 0.2 0.4  
8 S1_92199236 6,440,114 0.1 0.12  
9 S1_98916246 13,157,124 0.22 0.1 Latitude
10 S1_109332316 5,100,157 0.16 0.14  
11 S1_109332327 5,100,168 0.21 0.25  
12 S1_110307739 6,075,580 0.21 0.18  
13 S1_122235324 4,783,720 0.25 0.13  
14 S1_131785203 786,955 0.3 0.11  
15 S1_166680858 11,596,004 0.14 0.1  
16 S1_174926422 5,114,912 0.2 0.04  
17 S1_190284134 8,569,870 0.35 0.1  
18 S1_190284138 8,569,874 0.16 0.06  
19 S1_238491065 11,486 0.16 0.15  
20 S1_238491098 11,519 0.36 0.15 V1, V10, V12, V13, V16, V18, Longitude
21 S1_241084639 2280 0.38 0.11 V12, V13, V16, V18, Longitude
  1. The significant SNP genotypes correlated with environmental variables for both the likelihood ratio (G) and Wald tests at the Bonferroni-corrected 0.05 alpha levels are shown. The variable numbers are explained in Additional file 1: Table S1