Population genomics and morphometric assignment of western honey bees (Apis mellifera L.) in the Republic of South Africa

Table 6 The list of divergent SNP loci for Apis mellifera scutellata using F_ST outlier and environmental correlation tests

No.	SNP loci	SNP Position	Heterozygosity	F_ST statistic	Environmental correlation
1	S1_22,206,418	22,206,418	0.21	0.1
2	S1_39180699	9,287,191	0.1	0.17
3	S1_75314820	3,919,070	0.17	0.08
4	S1_88966222	3,207,100	0.48	0.1	Latitude
5	S1_89371176	3,612,054	0.3	0.11
6	S1_90412686	4,653,564	0.13	0.12
7	S1_90545383	4,786,261	0.2	0.4
8	S1_92199236	6,440,114	0.1	0.12
9	S1_98916246	13,157,124	0.22	0.1	Latitude
10	S1_109332316	5,100,157	0.16	0.14
11	S1_109332327	5,100,168	0.21	0.25
12	S1_110307739	6,075,580	0.21	0.18
13	S1_122235324	4,783,720	0.25	0.13
14	S1_131785203	786,955	0.3	0.11
15	S1_166680858	11,596,004	0.14	0.1
16	S1_174926422	5,114,912	0.2	0.04
17	S1_190284134	8,569,870	0.35	0.1
18	S1_190284138	8,569,874	0.16	0.06
19	S1_238491065	11,486	0.16	0.15
20	S1_238491098	11,519	0.36	0.15	V1, V10, V12, V13, V16, V18, Longitude
21	S1_241084639	2280	0.38	0.11	V12, V13, V16, V18, Longitude

The significant SNP genotypes correlated with environmental variables for both the likelihood ratio (G) and Wald tests at the Bonferroni-corrected 0.05 alpha levels are shown. The variable numbers are explained in Additional file 1: Table S1

ISSN: 1471-2164