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Fig. 1 | BMC Genomics

Fig. 1

From: The landscape of mitochondrial small non-coding RNAs in the PGCs of male mice, spermatogonia, gametes and in zygotes

Fig. 1

The sncRNAs sequence coverages in the mitochondrial genome of male PGCs, spermatogonia, spermatozoa, oocytes and zygotes. Circular representation of the sncRNA coverage in mouse mtDNA. The radial bars represent the log transformation of the sncRNA read coverage. Reads from: primordial germ cells (PGC) are represented in red; spermatogonia (SPG) in blue; spermatozoa (SPZ) in green; oocytes (OCY) in purple; and zygotes (ZYGO) in gold. Annotation of the mitochondrial genes (dark blue), and the rRNA (light blue) and tRNA (red) was obtained from the Ensembl database. The read coverage was obtained using BedTools software and the circular representation was created using the Circleator tool. Coverage of the piR-7,456,245 region is indicated in the piRNA circle by a black arrow in the corresponding piRNA circle

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BMC Genomics

ISSN: 1471-2164

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