Type of DE Interactiona | Significant | Number of Genes |
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Inter-treatmentb | Single treatmentc | Heat + LPSd | Heat + LPS to Heat + Saline | Heat + LPS to Thermoneutral + LPS |
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Broiler | Fayoumi | Broiler | Fayoumi |
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Suppressed | Y | Y | N/Y | 1 | 0 | 0 | 199 |
Unaffected | N | Y | Y | 0 | 40 | 40 | 27 |
Induced | Y | N | Y | 95 | 22 | 1 | 529 |
- aInter-treatment comparisons (Heat + LPS to Heat + Saline or to Thermoneutral + LPS) identified three effects of combined treatment on DE (suppressed, unaffected, or induced). See Additional file 6 for examples of each interaction type
- bHeat + LPS to Heat + Saline or Heat + LPS to Thermoneutral + LPS
- cHeat + Saline to Thermoneutral + Saline or Thermoneutral + LPS to Thermoneutral + Saline
- dHeat + LPS to Thermoneutral + Saline
- Differential expression (DE), lipopolysaccharide (LPS), yes (Y), no (N)