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Table 2 Analysis of the biological processes associated with the DEGs using the PANTHER tool

From: Genome-wide transcriptome analysis using RNA-Seq reveals a large number of differentially expressed genes in a transient MCAO rat model

Biological Processes IR4.5 vs. SH4.5 IR24 vs. SH24 IR24 vs. IR4.5 SH24 vs. SH4.5
cellular process (GO:0009987) 189 675 920 245
metabolic process (GO:0008152) 136 450 661 168
biological regulation (GO:0065007) 73 257 326 93
response to stimulus (GO:0050896) 72 226 275 73
localization (GO:0051179) 37 154 192 49
cellular component organization or biogenesis (GO:0071840) 34 151 205 50
developmental process (GO:0032502) 32 139 164 45
multicellular organismal process (GO:0032501) 19 122 167 37
immune system process (GO:0002376) 21 59 51 14
biological adhesion (GO:0022610) 15 44 40 10
locomotion (GO:0040011) 15 37 43 9
reproduction (GO:0000003) 1 10 12 5
rhythmic process (GO:0048511) 2 1 3 3
  1. Associative analysis for all comparison groups was carried out according to the Gene Ontology (GO) database