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Table 5 Telomere repeats and organization in isolates Pst (93–210) and Psh (93TX-2) genomes of Puccinia striiformis

From: Genomic insights into host adaptation between the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici) and the barley stripe rust pathogen (Puccinia striiformis f. sp. hordei)

Contig name Contig size (bp) Start of telomeric array End of telomeric array Size of telomeric array (bp)a Position of telomere on contig Number of telomeric repeats (5′-3′)
Pst (93–210)
 Contig1.035 512,194 511,887 512,194 307 end (TTTTAGGG)11(TTAGGG)38
 Contig1.074 318,575 318,319 318,575 257 end (TTTTAGGG)17(TTAGGG)21
 Contig1.124 232,724 232,418 232,724 307 end (TTTTAGGG)16(TTAGGG)32
 Contig1.178 156,450 156,143 156,450 307 end (TTTTAGGG)10(TTAGGG)40
 Contig1.186 147,797 147,519 147,797 279 end (TTTTAGGG)10(TTAGGG)35
 Contig1.196 140,041 139,736 140,041 306 end (TTTTAGGG)8(TTAGGG)40
 Contig1.227 113,221 112,944 113,221 268 end (TTTTAGGG)10(TTAGGG)33
 Contig1.423 31,619 31,319 31,619 301 end (TTTTAGGG)14(TTAGGG)32
 Contig1.026 542,491 542,248 542,491 244 end (TTAGGG)42
 Contig1.083 295,440 295,160 295,440 281 end (TTAGGG)47
 Contig1.087 289,332 289,039 289,332 294 end (TTAGGG)49
 Contig1.127 230,054 229,794 230,054 261 end (TTAGGG)46
 Contig1.151 197,251 197,012 197,251 240 end (TTAGGG)40
 Contig1.206 132,791 132,533 132,791 259 end (TTAGGG)43
 Contig1.212 128,166 127,952 128,166 215 end (TTAGGG)35
 Contig1.284 76,604 76,345 76,604 260 end (TTAGGG)43
Psh (93TX-2)
 Contig1.118 212,623 212,376 212,623 248 end (TTAGGG)42
 Contig1.162 163,479 163,194 163,479 286 end (TTAGGG) 47
 Contig1.169 159,050 158,860 159,050 191 end (TTAGGG)31
 Contig1.300 84,330 84,093 84,330 238 end (TTAGGG)40
 Contig1.402 53,760 53,511 53,750 240 end (TTAGGG)42
  1. aSize of telomeric array is the size in the assembly. Because there are miss-assembled deletions in the telomere regions, this size is not equal to the calculated size from the last column