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Table 1 General Genome Features

From: Comparative genome analysis reveals key genetic factors associated with probiotic property in Enterococcus faecium strains

Features Probiotic Non-Pathogenic Pathogenic
T110 17OM39 NRRLB-2354 64/3 DO Aus0004 Aus0085 6E6 E39 ATCC 700221
Size (mb) 2.6 2.6 2.6 2.5 2.6 2.9 2.9 2.9 2.7 2.8
GC% 38.4 38.5 37.8 38.2 37.9 38.3 37.9 37.6 37.8 37.8
Genes 2639 2865 2771 2508 2795 2960 3214 3404 3043 3145
CDS 2502 2639 2658 2418 2703 2825 2938 3307 2907 2725
Pseudo Genes 54 148 47 32 32 70 181 73 44 326
rRNAs (5S, 16S, 23S) 6, 6, 6 6, 6,6 6, 6, 6 6, 6, 6 6, 6, 6 6, 6, 6 6, 6, 6 6, 6, 6 6, 6, 6 6, 6, 6
tRNAs 65 62 48 68 62 47 76 75 70 72
Plasmid 1 1 3 3 6 2 5 3
Accession code NZ_CP006030.1 LWHF 00000000.1 NC_020207.1 NZ_CP012522.1 NC_017960.1 NC_017022.1 NC_021994.1 NZ_CP013994.1 NZ_CP011281.1 CP 014449.1
Source probiotic feces cheese feces blood blood blood feces blood feces
Country Japan India Germany USA Australia Australia USA USA USA
Reference Natarajan and Parani 2015 Ghattargi et al. 2018 Kopit et al. 2014 Bender et al. 2015 Lam et al. 2012 Qin et al. 2012 Qin et al. 2012 Geldart and Kaznessis 2017 Geldart and Kaznessis 2017 McKenney et al. 2016