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Table 4 Number of genes responsible for survival in GI track within Enterococcus genomes

From: Comparative genome analysis reveals key genetic factors associated with probiotic property in Enterococcus faecium strains

Property Probiotic Non-pathogenic
Non-probiotic
Pathogenic
CATEGORY GENES T110 17OM39 NRRL B-2354 64/3 DO Aus0004 Aus0085 6_E6 E39 ATCC 700221
Acid resistance LBA0995 3/5 3/5 3/5 3/5 4/5 4/5 5/5 4/5 4/5 3/5
LBA1524
LBA1272
gadC
rrp-1
Bile resistance LBA1430 4/4 4/4 4/4 4/4 4/4 4/4 4/4 4/4 4/4 4/4
clpE
dps
LBA1429
Competitive copA 3/3 3/3 2/3 2/3 2/3 2/3 2/3 2/3 2/3 2/3
met
pts14C
Adherence lsp 2/3 2/3 3/3 3/3 3/3 3/3 3/3 3/3 3/3 3/3
FbpA
ispA
Persistence LJ1656 4/4 4/4 4/4 4/4 4/4 4/4 4/4 4/4 4/4 4/4
msrB
LJ1654
clpC
Bile salt hydrolase bsh 1/1 1/1 1/1 1/1 1/1 1/1 1/1 1/1 1/1 1/1
Growth treC 1/1 1/1 1/1 1/1 1/1 1/1 1/1 1/1 1/1 1/1
Adaptation Lr1265 1/2 1/2 1/2 1/2 1/2 2/2 2/2 2/2 2/2 2/2
Lr1584