Fig. 7

Distribution of GWAS peaks. Pie charts showing the proportion of GWAS peaks identified using deviation versus non-deviation phenotype data (a), at location = KARE (UC Kearney) versus location = WREC (Westside Research and Extension) (b)., and for all combinations of DV vs NDV at the two locations (c). a All peaks were classified as DV and/or NDV, where DV peaks were those identified using the phenotype data calculated as the deviation between either the pre-flowering stress treatment or the post-flowering stress treatment and the control, and the NDV peaks were those identified using the raw phenotype data. The majority of peaks were identified regardless of whether DV or NDV data were used. c Each wedge shows the proportion of the peaks that were only identified for a particular combination of data, e.g., the largest proportion of peaks (~ 20%) were identified only using NDV data from KARE, DV data from WREC and NDV data from WREC