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Table 4 Functional annotation of 15 genes listed in Table 1

From: Differential genetic responses to the stress revealed the mutation-order adaptive divergence between two sympatric ginger species

   

BLASTP

BLASTX

     

Transcript Id

UniprotKB gene

Protein

e value

bit score

e value

bit score

Pfam

COGs (EggNog)

Pathways

EC number

KEGGs

DN30045_c2_g6_i1

–

 

–

–

–

–

.

.

–

–

.

DN32090_c10_g8_i1

–

 

–

–

–

–

.

.

–

–

.

DN32090_c10_g5_i9

RGA2_SOLBU

Disease resistance protein RGA2

1.80E-23

101

3.16E-24

104

PF00931.21: NB-ARC domain

.

–

–

.

DN31496_c1_g1_i13

RGA2_SOLBU

Disease resistance protein RGA2

4.85E-13

71.6

2.33E-09

61.6

PF00931.21: NB-ARC domain

.

–

–

.

DN32036_c1_g2_i5

RPM1_ARATH

Disease resistance protein RPM1

3.33E-48

176

1.61E-52

191

.

COG4886: leucine Rich Repeat

osa04626 (Plant-Pathogen Interaction)

–

KO:K13457

DN31537_c1_g4_i6

WAK2_ARATH

Wall-associated receptor kinase 2

3.10E-133

408

2.03E-132

407

PF13947.5: Wall-associated receptor kinase galacturonan-binding

COG0515: Serine Threonine protein kinase

–

2.7.11

.

PF08488.10: Wall-associated kinase

PF07645.14: Calcium-binding EGF domain

PF00069.24: Protein kinase domain

PF07714.16: Protein tyrosine kinase

DN31659_c3_g1_i5

–

–

–

–

–

–

PF03732.16: Retrotransposon gag protein

.

–

–

.

DN28640_c0_g2_i1

POLX_TOBAC

Retrovirus-related Pol polyprotein from transposon TNT 1–94

1.52E-76

277

5.95E-62

233

PF14223.5: gag-polypeptide of LTR copia-type

.

–

2.7.7.49

.

PF13917.5: Zinc knuckle

3.4.23

PF13976.5: GAG-pre-integrase domain

PF00665.25: Integrase core domain

DN30152_c4_g8_i1

–

 

–

–

–

–

.

.

–

–

.

DN26431_c0_g1_i1

PRX2C_ARATH

Peroxiredoxin-2C

1.81E-88

264

4.42E-85

257

PF02966.15: Mitosis protein DIM1

COG0678: peroxiredoxin

–

1.11.1.15

.

PF08534.9: Redoxin

1.11.1.7

PF00578.20: AhpC/TSA family

DN30898_c1_g1_i2

RGA1_SOLBU

Putative disease resistance protein RGA1

3.29E-34

141

1.14E-33

141

.

.

–

–

.

DN32090_c10_g5_i10

R13L1_ARATH

Putative disease resistance RPP13-like protein 1

2.70E-41

164

2.45E-31

134

PF13855.5: Leucine rich repeat

COG4886: leucine Rich Repeat

–

–

.

PF13516.5: Leucine Rich repeat

DN31607_c0_g4_i2

–

 

–

–

–

–

.

 

–

–

.

DN31888_c2_g1_i14

C71A1_ZINZE

Alpha-humulene 10-hydroxylase

3.00E-90

274

3.34E-90

274

PF00067.21: Cytochrome P450

 

–

1.14.13.150

.

DN26862_c0_g2_i1

M3K1_ARATH

Mitogen-activated protein kinase kinase kinase 1

9.38E-72

242

3.62E-60

211

PF00069.24: Protein kinase domain

ENOG410XQGS: mitogen-activated

osa04016 (Plant-Pathogen Interaction)

2.7.1

KO:K13414

PF07714.16: Protein tyrosine kinase

protein kinase kinase kinase

osa04626 (MEPK Signaling Pathway)

2.7.11.25