Matched Events
|
---|
Matched Events
|
Significant in both (R+M+)
|
FDR (RNASeq)
|
FDR (arrays)
|
6222
|
1324
|
4.96e-4
|
6.23e-4
|
R+M∅ | R∅M+
|
Expression Threshold
|
Detected Events
|
FDR
|
Expression Threshold
|
Detected Events
|
FDR for significant
|
Junction coverage > 6 FPKM
|
2973
|
2.44e-4
|
Signal > 50%
|
1016
|
1.46e-3
|
Junction coverage > 2 FPKM
|
10,617
|
4.56e-4
|
Signal > 25%
|
3297
|
1.99e-3
|
Junction coverage > 2/3 FPKM
|
25,063
|
6.90e-4
|
No threshold
|
7581
|
4.85e-3
|
- Where thresholds not shown, default filters were employed (junction coverage > 2 FPKM for RNA-seq; upper quartile probe signal for microarrays)