Table 2 Number of AS events detected per technology, alongside statistical significance of events against distinct thresholds
Matched Events | |||||
|---|---|---|---|---|---|
Matched Events | Significant in both (R+M+) | FDR (RNASeq) | FDR (arrays) | ||
6222 | 1324 | 4.96e-4 | 6.23e-4 | ||
R+M∅ | R∅M+ | ||||
Expression Threshold | Detected Events | FDR | Expression Threshold | Detected Events | FDR for significant |
Junction coverage > 6 FPKM | 2973 | 2.44e-4 | Signal > 50% | 1016 | 1.46e-3 |
Junction coverage > 2 FPKM | 10,617 | 4.56e-4 | Signal > 25% | 3297 | 1.99e-3 |
Junction coverage > 2/3 FPKM | 25,063 | 6.90e-4 | No threshold | 7581 | 4.85e-3 |