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Fig. 2 | BMC Genomics

Fig. 2

From: Sequence homology in eukaryotes (SHOE): interactive visual tool for promoter analysis

Fig. 2

Example of SHOE-Garuda workflow. SHOE is a member of the Garuda platform. It can output results and acquire data from other tools, such as Panther, CellDesigner, and others via gadget connecting SHOE and Garuda platform. To CellDesigner SHOE connects with and without Garuda gadget, using a solely CellDesigner plugin. SHOE has its native gadget GeneViz for the visualization of the gene network obtained on Pearson correlation analysis. GeneViz does a straightforward search in the Reactome database to visualize pathways present in the analysis dataset

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