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Table 2 Selected candidate genes specified to be induced in different tissues during thermal stress in different fish species (Literature references for thermal stress)

From: Developing specific molecular biomarkers for thermal stress in salmonids

Gene

Functional group

Study (tissue and species)

SERPINH1

Upregulation

Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), O. mykiss (Rebl et al. [6]; Wang et al. [7]), O. tshawytscha (Tomalty et al. 17]), Hypomesus transpacificus (Komoroske et al. [16])

Liver Gadus morhua (Hori et al. [46]), O. mykiss (Wang et al. [7]), Puntius sophore (Mahanty et al. [48])

Muscle G. morhua (Hori et al. [46])

Kidney G. morhua (Hori et al. [46]), O. mykiss (Verleih et al. [45]; Wang et al. [7])

HSP90

Upregulation

Gill Gillichthys mirabilis (Buckley et al. [64]; Logan & Somero, [59, 62]), O. nerka (Jeffries et al. [30]; Jeffries et al. [9]), O. gorbuscha (Jeffries et al. [9]), Salvelinus alpinus (Quinn et al. [33]), Fundulus heteroclitus (Healy et al. [56]), H. transpacificus (Komoroske et al. [16]), Ictalurus punctatus (Liu et al. [13]), O. mykiss (Rebl et al. [6]), O. tshawytscha (Tomalty et al. [17])

Liver Aphanius ginaunis (Akbarzadeh & Leder, [96]), Austrofundulus limnaeus (Podrabsky & Somero, [81]), G. morhua (Hori et al. [46]), Salmo salar (Olsvic et al. [97]), Melanotaenia duboulayi (Smith et al. [98]), I. punctatus (Liu et al. [13])

Cardiac O. nerka (Anttila et al. [12]), O. mykiss (Vornanen et al. [11])

Muscle G. mirabilis (Buckley et al. [64]), G. morhua (Hori et al. [46]), F. heteroclitus (Healy et al. [56]), Lates calcarifer (Newton et al. [99])

Kidney G. morhua (Hori et al. [46]), O. mykiss (Verleih et al. [45])

Red blood cells O. mykiss (Lewis et al. [34])

Testis A. ginaunis (Akbarzadeh & Leder, [96])

HSP70/ HSC71

Upregulation

Gill G. mirabilis (Buckley et al. [64]; Logan & Somero, [62]), S. alpinus (Quinn et al. [33]), O. mykiss (Rebl et al. [6]), F. heteroclitus (Healy et al. [56]), H. transpacificus (Komoroske et al. [16]), I. punctatus (Liu et al. [13]), O. tshawytscha (Tomalty et al. [17])

Liver A. ginaunis (Akbarzadeh & Leder, [96]), A. limnaeus (Podrabsky & Somero, [81]), G. morhua (Hori et al. [46]), M. duboulayi (Smith et al. [98]), I. punctatus (Liu et al. [13])

Cardiac O. nerka (Anttila et al. [12]), S. salar (Lund et al. [100])

Muscle G. morhua (Hori et al. [46])

Kidney G. morhua (Hori et al. [46]), O. mykiss (Verleih et al. [45])

Red blood cells O. mykiss (Lewis et al. [34])

Testis A. ginaunis (Akbarzadeh & Leder, [96])

PDIA4

Upregulation

Gill O. nerka (Jeffries et al. [30]), O. tshawytscha (Tomalty et al. [17]), G. mirabilis (Buckley et al. [64]; Logan & Somero, [62]), Trematomus bernacchii (Buckley & Somero, [65]), I. punctatus (Liu et al. [13])

Liver I. punctatus (Liu et al. [13])

SEPW1

Upregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

MAP3K14

Upregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

PARK7

Upregulation

Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9])

COX6B1

Upregulation

Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), O. mykiss (Garvin et al. [101])

EIF4A2

Upregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9]), G. mirabilis (Buckley et al. [64])

EIF4ENIF1

Upregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

Kidney O. mykiss (Verleih et al. [45])

TUBA1A

Upregulation

Muscle L. calcarifer (Newton et al. [99])

NEK4

Upregulation

Gill G. mirabilis (Buckley et al. [64]; Logan & Somero, [59, 62])

Liver F. heteroclitus (Picard & Schulte, [102])

UBE2Q2

Upregulation

Gill O. tshawytscha (Tomalty et al. [17])

Kidney O. mykiss (Verleih et al. [45])

Liver M. duboulayi (Smith et al. [98])

FKBP10

Downregulation

Gill O. nerka, O. gorbuscha (Jeffries et al. [9]), G. mirabilis (Logan & Somero, [62]), I. punctatus (Liu et al. [13])

CIRBP

Downregulation

Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), O. mykiss (Rebl et al. -6])

Kidney O. mykiss (Verleih et al. [45])

SFRS2 / SFRS9

Downregulation

Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9])

EEF2

Downregulation

Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), G. mirabilis (Logan & Somero, [62])

Kidney O. mykiss (Verleih et al. [45])

SCFD1

Downregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

MPDU1

Downregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

IDH3B

Downregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

Muscle G. mirabilis (Buckley et al. [64])

zgc:63572

Downregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

KCT2

Downregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

AP3S1

Downregulation

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])

ZMYND11

–

Gill O. nerka & O. gorbuscha (Jeffries et al. [9])