From: Developing specific molecular biomarkers for thermal stress in salmonids
Gene | Functional group | Study (tissue and species) |
---|---|---|
SERPINH1 | Upregulation | Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), O. mykiss (Rebl et al. [6]; Wang et al. [7]), O. tshawytscha (Tomalty et al. 17]), Hypomesus transpacificus (Komoroske et al. [16]) Liver Gadus morhua (Hori et al. [46]), O. mykiss (Wang et al. [7]), Puntius sophore (Mahanty et al. [48]) Muscle G. morhua (Hori et al. [46]) Kidney G. morhua (Hori et al. [46]), O. mykiss (Verleih et al. [45]; Wang et al. [7]) |
HSP90 | Upregulation | Gill Gillichthys mirabilis (Buckley et al. [64]; Logan & Somero, [59, 62]), O. nerka (Jeffries et al. [30]; Jeffries et al. [9]), O. gorbuscha (Jeffries et al. [9]), Salvelinus alpinus (Quinn et al. [33]), Fundulus heteroclitus (Healy et al. [56]), H. transpacificus (Komoroske et al. [16]), Ictalurus punctatus (Liu et al. [13]), O. mykiss (Rebl et al. [6]), O. tshawytscha (Tomalty et al. [17]) Liver Aphanius ginaunis (Akbarzadeh & Leder, [96]), Austrofundulus limnaeus (Podrabsky & Somero, [81]), G. morhua (Hori et al. [46]), Salmo salar (Olsvic et al. [97]), Melanotaenia duboulayi (Smith et al. [98]), I. punctatus (Liu et al. [13]) Cardiac O. nerka (Anttila et al. [12]), O. mykiss (Vornanen et al. [11]) Muscle G. mirabilis (Buckley et al. [64]), G. morhua (Hori et al. [46]), F. heteroclitus (Healy et al. [56]), Lates calcarifer (Newton et al. [99]) Kidney G. morhua (Hori et al. [46]), O. mykiss (Verleih et al. [45]) Red blood cells O. mykiss (Lewis et al. [34]) Testis A. ginaunis (Akbarzadeh & Leder, [96]) |
HSP70/ HSC71 | Upregulation | Gill G. mirabilis (Buckley et al. [64]; Logan & Somero, [62]), S. alpinus (Quinn et al. [33]), O. mykiss (Rebl et al. [6]), F. heteroclitus (Healy et al. [56]), H. transpacificus (Komoroske et al. [16]), I. punctatus (Liu et al. [13]), O. tshawytscha (Tomalty et al. [17]) Liver A. ginaunis (Akbarzadeh & Leder, [96]), A. limnaeus (Podrabsky & Somero, [81]), G. morhua (Hori et al. [46]), M. duboulayi (Smith et al. [98]), I. punctatus (Liu et al. [13]) Cardiac O. nerka (Anttila et al. [12]), S. salar (Lund et al. [100]) Muscle G. morhua (Hori et al. [46]) Kidney G. morhua (Hori et al. [46]), O. mykiss (Verleih et al. [45]) Red blood cells O. mykiss (Lewis et al. [34]) Testis A. ginaunis (Akbarzadeh & Leder, [96]) |
PDIA4 | Upregulation | Gill O. nerka (Jeffries et al. [30]), O. tshawytscha (Tomalty et al. [17]), G. mirabilis (Buckley et al. [64]; Logan & Somero, [62]), Trematomus bernacchii (Buckley & Somero, [65]), I. punctatus (Liu et al. [13]) Liver I. punctatus (Liu et al. [13]) |
SEPW1 | Upregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
MAP3K14 | Upregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
PARK7 | Upregulation | Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]) |
COX6B1 | Upregulation | Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), O. mykiss (Garvin et al. [101]) |
EIF4A2 | Upregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]), G. mirabilis (Buckley et al. [64]) |
EIF4ENIF1 | Upregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) Kidney O. mykiss (Verleih et al. [45]) |
TUBA1A | Upregulation | Muscle L. calcarifer (Newton et al. [99]) |
NEK4 | Upregulation | Gill G. mirabilis (Buckley et al. [64]; Logan & Somero, [59, 62]) Liver F. heteroclitus (Picard & Schulte, [102]) |
UBE2Q2 | Upregulation | Gill O. tshawytscha (Tomalty et al. [17]) Kidney O. mykiss (Verleih et al. [45]) Liver M. duboulayi (Smith et al. [98]) |
FKBP10 | Downregulation | Gill O. nerka, O. gorbuscha (Jeffries et al. [9]), G. mirabilis (Logan & Somero, [62]), I. punctatus (Liu et al. [13]) |
CIRBP | Downregulation | Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), O. mykiss (Rebl et al. -6]) Kidney O. mykiss (Verleih et al. [45]) |
SFRS2 / SFRS9 | Downregulation | Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]) |
EEF2 | Downregulation | Gill O. nerka (Jeffries et al. [9, 30]), O. gorbuscha (Jeffries et al. [9]), G. mirabilis (Logan & Somero, [62]) Kidney O. mykiss (Verleih et al. [45]) |
SCFD1 | Downregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
MPDU1 | Downregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
IDH3B | Downregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) Muscle G. mirabilis (Buckley et al. [64]) |
zgc:63572 | Downregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
KCT2 | Downregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
AP3S1 | Downregulation | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |
ZMYND11 | – | Gill O. nerka & O. gorbuscha (Jeffries et al. [9]) |