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Table 1 The detailed information of potato MADS-box gene family. Genes with an asterisk tail means identified in previous studies

From: Genome-wide survey of potato MADS-box genes reveals that StMADS1 and StMADS13 are putative downstream targets of tuberigen StSP6A

Name

Locus

Chromosomal locations

Protein (aa)

Exon

Subfamily

StMADS1*

PGSC0003DMG400004081

chr06 51191112–51198207

250

8

MIKCC

StMADS2

PGSC0003DMG401006771

chr01 64818874–64826057

287

8

MIKCC

StMADS3

PGSC0003DMG400000008

chr01 71388491–71392334

224

8

MIKCC

StMADS4

PGSC0003DMG400000136

chr01 71421222–71426490

255

8

MIKCC

StMADS5

PGSC0003DMG400026563

chr02 24953367–24959857

234

8

MIKCC

StMADS6

PGSC0003DMG400028442

chr02 31027789–31034809

248

9

MIKCC

StMADS7

PGSC0003DMG400003541

chr02 39864994–39869063

225

7

MIKCC

StMADS8

PGSC0003DMG400001378

chr02 45341112–45345702

247

8

MIKCC

StMADS9

PGSC0003DMG400001377

chr02 45353007–45357495

246

8

MIKCC

StMADS10

PGSC0003DMG401024252

chr03 41578383–41583244

119

3

MIKCC

StMADS11*

PGSC0003DMG400033570

chr01 82400439–82408299

221

9

MIKCC

StMADS12

PGSC0003DMG401015205

chr03 50457307–50460580

200

8

MIKCC

StMADS13

PGSC0003DMG400024625

chr03 54879384–54886641

248

8

MIKCC

StMADS14

PGSC0003DMG400024626

chr03 54896515–54901975

246

8

MIKCC

StMADS15

PGSC0003DMG400003709

chr04 70409561–70413264

228

7

MIKCC

StMADS16*

PGSC0003DMG400009363

chr04 64959661–64967188

235

11

MIKCC

StMADS17

PGSC0003DMG400028359

chr05 757295–763364

242

8

MIKCC

StMADS18

PGSC0003DMG400028358

chr05 766418–772401

244

8

MIKCC

StMADS19

PGSC0003DMG400021899

chr05 14664987–14671873

241

8

MIKCC

StMADS20

PGSC0003DMG400025279

chr06 36656761–36660368

111

3

MIKCC

StMADS21

PGSC0003DMG400005176

chr06 47282868–47291175

232

9

MIKCC

StMADS22

PGSC0003DMG400017295

chr07 51027282–51036001

254

6

MIKCC

StMADS23

PGSC0003DMG401007392

chr08 40704456–40708461

210

7

MIKCC

StMADS24

PGSC0003DMG400022748

chr08 53768699–53776641

224

7

MIKCC

StMADS25

PGSC0003DMG400010263

chr10 38698247–38706939

214

6

MIKCC

StMADS26

PGSC0003DMG400023729

chr10 57811655–57814557

229

7

MIKCC

StMADS27

PGSC0003DMG400016203

chr11 2317625–2323465

238

8

MIKCC

StMADS28

PGSC0003DMG400025525

chr11 16127866–16137240

232

7

MIKCC

StMADS29

PGSC0003DMG401018787

chr11 16991875–16995488

116

4

MIKCC

StMADS30

PGSC0003DMG400001938

chr00 12593321–12596548

188

2

MIKCC

StMADS31

PGSC0003DMG400019525

chr03 55865548–55867778

142

3

MIKC*

StMADS32

PGSC0003DMG400038617

chr04 31598124–31598495

84

2

MIKC*

StMADS33

PGSC0003DMG400036414

chr04 52111872–52112228

82

2

MIKC*

StMADS34

PGSC0003DMG400044568

chr04 52327361–52331720

158

3

MIKC*

StMADS35

PGSC0003DMG400045842

chr06 35336837–35338244

151

5

MIKC*

StMADS36

PGSC0003DMG401026197

chr07 47364697–47367540

155

6

MIKC*

StMADS37

PGSC0003DMG403026197

chr07 47437818–47445958

94

9

MIKC*

StMADS38

PGSC0003DMG400017759

chr12 55492383–55493047

108

2

MIKC*

StMADS39

PGSC0003DMG400017760

chr12 55554242–55562194

225

3

MIKC*

StMADS40

PGSC0003DMG400038539

chr01 14769002–14769334

110

1

Mα

StMADS41

PGSC0003DMG400045528

chr01 40043124–40043513

129

1

Mα

StMADS42

PGSC0003DMG400011328

chr01 57376759–57377670

303

1

Mα

StMADS43

PGSC0003DMG400011316

chr01 57795443–57796789

421

1

Mα

StMADS44

PGSC0003DMG400006290

chr01 60247610–60248203

197

1

Mα

StMADS45

PGSC0003DMG400041956

chr01 60265275–60265868

197

1

Mα

StMADS46

PGSC0003DMG400046706

chr01 60293060–60293646

189

2

Mα

StMADS47

PGSC0003DMG400000062

chr01 72596658–72597790

143

1

Mα

StMADS48

PGSC0003DMG400040999

chr01 75519222–75519740

172

1

Mα

StMADS49

PGSC0003DMG400022465

chr01 75665917–75666411

495

1

Mα

StMADS50

PGSC0003DMG400022464

chr01 75669936–75670403

155

1

Mα

StMADS51

PGSC0003DMG400037739

chr01 75677724–75678191

155

1

Mα

StMADS52

PGSC0003DMG400022462

chr01 75682108–75682572

154

1

Mα

StMADS53

PGSC0003DMG400022460

chr01 75693397–75693888

163

1

Mα

StMADS54

PGSC0003DMG400044662

chr01 75699473–75699940

155

1

Mα

StMADS55

PGSC0003DMG400042000

chr01 75715667–75716134

155

1

Mα

StMADS56

PGSC0003DMG400035140

chr01 75719828–75720178

116

1

Mα

StMADS57

PGSC0003DMG400005119

chr01 83295937–83296952

213

1

Mα

StMADS58

PGSC0003DMG400044387

chr01 83297295–83297960

221

1

Mα

StMADS59

PGSC0003DMG400005131

chr01 83300154–83300747

197

1

Mα

StMADS60

PGSC0003DMG400046652

chr02 14861994–14862299

101

1

Mα

StMADS61

PGSC0003DMG400038730

chr02 15687958–15688452

164

1

Mα

StMADS62

PGSC0003DMG400013012

chr02 22892178–22892726

182

1

Mα

StMADS63

PGSC0003DMG400039595

chr02 25493501–25494016

171

1

Mα

StMADS64

PGSC0003DMG400042442

chr03 3618726–3619148

140

1

Mα

StMADS65

PGSC0003DMG400037384

chr03 3660635–3661183

182

1

Mα

StMADS66

PGSC0003DMG400045551

chr03 4972791–4973312

173

1

Mα

StMADS67

PGSC0003DMG400046651

chr03 13264973–13265449

158

1

Mα

StMADS68

PGSC0003DMG400037338

chr04 750699–751226

175

1

Mα

StMADS69

PGSC0003DMG400019742

chr04 9343623–9346031

90

6

Mα

StMADS70

PGSC0003DMG400040226

chr04 21299801–21300325

174

1

Mα

StMADS71

PGSC0003DMG400041035

chr04 27499096–27499626

176

1

Mα

StMADS72

PGSC0003DMG400036160

chr04 27559777–27560277

166

1

Mα

StMADS73

PGSC0003DMG400044513

chr04 27753241–27753636

131

1

Mα

StMADS74

PGSC0003DMG400040625

chr04 27761388–27761732

114

1

Mα

StMADS75

PGSC0003DMG400035221

chr04 27826362–27826868

168

1

Mα

StMADS76

PGSC0003DMG400036006

chr04 28232462–28232779

105

1

Mα

StMADS77

PGSC0003DMG400034832

chr04 28463661–28464235

164

2

Mα

StMADS78

PGSC0003DMG400040127

chr04 28566215–28566718

167

1

Mα

StMADS79

PGSC0003DMG400045239

chr04 29232278–29232646

122

1

Mα

StMADS80

PGSC0003DMG400042688

chr04 49390684–49391226

180

1

Mα

StMADS81

PGSC0003DMG400044761

chr04 49734932–49735474

180

1

Mα

StMADS82

PGSC0003DMG400039153

chr04 54460837–54461322

161

1

Mα

StMADS83

PGSC0003DMG400037581

chr04 54575543–54576028

161

1

Mα

StMADS84

PGSC0003DMG400024799

chr04 58551552–58552247

231

1

Mα

StMADS85

PGSC0003DMG400040743

chr06 10343031–10343519

162

1

Mα

StMADS86

PGSC0003DMG400040848

chr06 45773429–45773971

180

1

Mα

StMADS87

PGSC0003DMG400043595

chr07 15176598–15177149

183

1

Mα

StMADS88

PGSC0003DMG400004482

chr08 38320573–38321088

171

1

Mα

StMADS89

PGSC0003DMG400029147

chr08 38625243–38625695

150

1

Mα

StMADS90

PGSC0003DMG400039537

chr09 4843300–4843812

170

1

Mα

StMADS91

PGSC0003DMG400036125

chr09 6381512–6381946

144

1

Mα

StMADS92

PGSC0003DMG400043218

chr09 8426313–8426747

144

1

Mα

StMADS93

PGSC0003DMG400038182

chr09 8460217–8460714

165

1

Mα

StMADS94

PGSC0003DMG400043614

chr09 28872055–28872590

149

2

Mα

StMADS95

PGSC0003DMG400040285

chr09 45285005–45285310

101

1

Mα

StMADS96

PGSC0003DMG400037372

chr09 45311443–45311877

144

1

Mα

StMADS97

PGSC0003DMG400019393

chr10 6655038–6655631

173

1

Mα

StMADS98

PGSC0003DMG400043633

chr10 13335280–13335894

204

1

Mα

StMADS99

PGSC0003DMG400035501

chr10 16298995–16299315

106

1

Mα

StMADS100

PGSC0003DMG400042890

chr10 43539248–43539784

178

1

Mα

StMADS101

PGSC0003DMG400039674

chr10 43571982–43572518

178

1

Mα

StMADS102

PGSC0003DMG400036190

chr11 36057399–36057959

186

1

Mα

StMADS103

PGSC0003DMG400047285

chr11 36128116–36128568

150

1

Mα

StMADS104

PGSC0003DMG400039835

chr11 36737512–36737970

152

1

Mα

StMADS105

PGSC0003DMG400043978

chr11 41767865–41768500

211

1

Mα

StMADS106

PGSC0003DMG400038207

chr11 41778980–41779333

117

1

Mα

StMADS107

PGSC0003DMG400001143

chr11 41867026–41867556

176

1

Mα

StMADS108

PGSC0003DMG400044457

chr12 52437112–52437654

180

1

Mα

StMADS109

PGSC0003DMG400046733

chr00 38424953–38425450

165

1

Mα

StMADS110

PGSC0003DMG400046736

chr01 44165290–44165835

181

1

Mβ

StMADS111

PGSC0003DMG400037342

chr01 60364849–60365394

181

1

Mβ

StMADS112

PGSC0003DMG400024916

chr01 80241931–80242893

320

1

Mβ

StMADS113

PGSC0003DMG400024902

chr01 80529617–80530232

139

1

Mβ

StMADS114

PGSC0003DMG400005968

chr04 1911128–1911634

168

1

Mβ

StMADS115

PGSC0003DMG400035463

chr05 9324497–9325042

181

1

Mβ

StMADS116

PGSC0003DMG400007682

chr05 9990538–9991511

157

1

Mβ

StMADS117

PGSC0003DMG400018623

chr05 10026168–10026958

219

1

Mβ

StMADS118

PGSC0003DMG400041411

chr05 51418059–51418661

200

1

Mβ

StMADS119

PGSC0003DMG400047062

chr06 8761350–8762057

235

1

Mβ

StMADS120

PGSC0003DMG400026582

chr06 44289139–44289651

131

1

Mβ

StMADS121

PGSC0003DMG400033092

chr06 52148889–52149384

131

1

Mβ

StMADS122

PGSC0003DMG400027886

chr07 39107047–39108380

299

2

Mβ

StMADS123

PGSC0003DMG400027613

chr11 12890859–12892025

388

1

Mβ

StMADS124

PGSC0003DMG400035247

chr11 13686758–13687444

228

1

Mβ

StMADS125

PGSC0003DMG400026881

chr11 17707080–17707472

130

1

Mβ

StMADS126

PGSC0003DMG400036234

chr11 29461097–29461483

128

1

Mβ

StMADS127

PGSC0003DMG400044576

chr11 40025123–40025641

172

1

Mβ

StMADS128

PGSC0003DMG400044231

chr12 10345869–10346366

165

1

Mβ

StMADS129

PGSC0003DMG400035476

chr12 10440142–10440801

219

1

Mβ

StMADS130

PGSC0003DMG400034608

chr12 10457590–10458198

202

1

Mβ

StMADS131

PGSC0003DMG400045649

chr12 10473059–10473718

219

1

Mβ

StMADS132

PGSC0003DMG400044285

chr12 11631459–11632118

219

1

Mβ

StMADS133

PGSC0003DMG400016835

chr00 15615908–15616303

131

1

Mβ

StMADS134

PGSC0003DMG400016838

chr00 15735051–15735446

131

1

Mβ

StMADS135

PGSC0003DMG400005533

chr00 27564359–27564892

177

1

Mβ

StMADS136

PGSC0003DMG400039981

chr00 27565967–27566461

164

1

Mβ

StMADS137

PGSC0003DMG400005534

chr00 27590544–27591083

179

1

Mβ

StMADS138

PGSC0003DMG400036527

chr01 45487714–45488157

147

1

Mγ

StMADS139

PGSC0003DMG400024023

chr01 45617221–45618372

383

1

Mγ

StMADS140

PGSC0003DMG400024024

chr01 45621657–45622640

327

1

Mγ

StMADS141

PGSC0003DMG400039025

chr03 5616516–5617253

245

1

Mγ

StMADS142

PGSC0003DMG400030053

chr04 20856443–20857615

390

1

Mγ

StMADS143

PGSC0003DMG400034827

chr04 23826227–23827363

378

1

Mγ

StMADS144

PGSC0003DMG400038060

chr05 38909497–38910506

213

2

Mγ

StMADS145

PGSC0003DMG400040524

chr05 39047174–39048184

336

1

Mγ

StMADS146

PGSC0003DMG400045326

chr05 39101622–39102656

344

1

Mγ

StMADS147

PGSC0003DMG400044997

chr05 39139534–39142691

349

2

Mγ

StMADS148

PGSC0003DMG400044633

chr05 41389552–41390400

282

1

Mγ

StMADS149

PGSC0003DMG400039358

chr05 43411054–43411578

174

1

Mγ

StMADS150

PGSC0003DMG400041221

chr05 43419172–43421058

259

2

Mγ

StMADS151

PGSC0003DMG400038225

chr05 43446588–43447571

327

1

Mγ

StMADS152

PGSC0003DMG400040157

chr07 41201874–41202581

235

1

Mγ

StMADS153

PGSC0003DMG400028638

chr12 50083239–50084024

261

1

Mγ