Gene | Len | Var | IDY | Loc | 2074A | 2074S | E5903 | 2074B | NSM | SM | aa-Var | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N-S | P-S | N-S | P-S | N-S | P-S | N-S | P-S | ||||||||
atp4 | 585 | 1 | 99.8 | 222 | ttT | Phe | ttT | Phe | ttT | Phe | ttC | Phe | 1 | 0 | Â |
atp8 | 465 | 1 | 99.8 | 171 | agA | Arg | agA | Arg | agA | Arg | agC | Ser | 0 | 3 | Ser-Arg |
atp9 | 225 | 1 | 99.6 | 27 | ggA | Gly | ggT | Gly | ggT | Gly | ggT | Gly | 1 | 0 | Â |
ccmB | 621 | 1 | 99.8 | 11 | cAt | His | cTt | Leu | cTt | Leu | cTt | Leu | 0 | 1 | Leu-His |
ccmFC | 1323 | 1 | 99.8 | 585 | gtC | Val | gtC | Val | gtC | Val | gtG | Val | Â | Â | Â |
cox1 | 1593 | 3 | 99.8 | 415 | Acc | Thr | Acc | Thr | Ccc | Pro | Acc | Thr | Â | Â | Thr-Pro |
960 | atA | Ile | atA | Ile | atA | Ile | atC | Ile | Â | Â | Â | ||||
1428 | atA | Ile | atA | Ile | atA | Ile | atC | Ile | 2 | 1 | Â | ||||
cox2 | 783 | 1 | 99.9 | 481 | Tta | Leu | Tta | Leu | Tta | Leu | Cta | Leu | 1 | 0 | Â |
cox3 | 798 | 4 | 99.6 | 157 | Ctc | Leu | Atc | Ile | Atc | Ile | Ctc | Leu | Â | Â | Leu-Ile |
294 | ttT | Pro | ttT | Pro | ttT | Pro | ttG | Leu | Â | Â | Pro-Leu | ||||
295 | Gct | Ala | Gct | Ala | Gct | Ala | Tct | Ser | 0 | 4 | Ala-Ser | ||||
matR | 1968 | 1 | 99.9 | 1858 | Aaa | Lys | Aaa | Lys | Aaa | Lys | Caa | Gln | 0 | 3 | Gln-Lys |
nad2 | 1467 | 1 | 99.9 | 783 | tcG | Ser | tcG | Ser | tcG | Ser | tcT | Ser | 1 | 0 | Â |
nad3 | 357 | 1 | 99.7 | 317 | tCt | Ser | tCt | Ser | tCt | Ser | tTt | Phe | 0 | 1 | Ser-Phe |
nad4 | 1488 | 3 | 99.8 | 33 | gaT | Asp | gaT | Asp | gaT | Asp | gaC | Asp | Â | Â | Â |
240 | atC | Ile | atC | Ile | atC | Ile | atA | Ile | Â | Â | Â | ||||
242 | aAt | Asn | aAt | Asn | aAt | Asn | aTT | Ile | 2 | 1 | Asn-Ile | ||||
nad7 | 1185 | 1 | 99.9 | 24 | atC | Ile | atC | Ile | atC | Ile | atA | Ile | 1 | 0 | Â |
rpl2 | 1005 | 2 | 99.8 | 45 | ttG | Leu | ttG | Leu | ttG | Leu | ttT | Phe | Â | Â | Phe-Leu |
292 | Ctc | Leu | Ctc | Leu | Ctc | Leu | Atc | Ile | 0 | 6 | Ile-Leu | ||||
rpl5 | 582 | 1 | 99.8 | 139 | Caa | Gln | Caa | Gln | Caa | Gln | Aaa | Lys | 0 | 3 | Lys-Gln |
rpl10 | 489 | 1 | 99.8 | 361 | Aaa | Lys | Aaa | Lys | Aaa | Lys | Gaa | Glu | 0 | 3 | Glu-Lys |
rpl16 | 435 | 1 | 99.5 | 270 | gtC | Val | gtC | Val | gtC | Val | gtA | Val | 1 | 0 | Â |
rps3 | 1707 | 3 | 99.8 | 1670 | aAg | Lys | aAg | Lys | aAg | Lys | aGg | Arg | Â | Â | Lys-Arg |
1676 | gGA | Gly | gGA | Gly | gGA | Gly | gAC | Asp | Â | Â | Gly-Asp | ||||
1678 | Cgt | Arg | Cgt | Arg | Cgt | Arg | Ggt | Gly | 0 | 3 | Arg-Gly | ||||
rps4 | 1098 | 1 | 99.9 | 535 | Caa | Gln | Caa | Gln | Caa | Gln | Aaa | Lys | 0 | 3 | Â |
rps10 | 333 | 1 | 99.4 | 311 | gTC | Val | gAA | Glu | gAA | Glu | gAA | Glu | 0 | 1 | Glu-Val |
sdh3 | 435 | 1 | 99.8 | 33 | ttC | Phe | ttC | Phe | ttC | Phe | ttA | Leu | 0 | 3 | Â |
nonsynonymous mutation | 31 | Â | Â | 10 | Â | 9 | Â | 10 | Â | 7 | total | 10 | 36 | 17 | |
Synonymous mutation | Â | Â | 1 | Â | 0 | Â | 0 | Â | 10 |