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Fig. 3 | BMC Genomics

Fig. 3

From: Comparative genome and transcriptome analysis of diatom, Skeletonema costatum, reveals evolution of genes for harmful algal bloom

Fig. 3

Differentially expressed genes extracted from RNA-seq data under different conditions. a Differentially expressed genes among Sc culture samples for different temperatures, 10 °C, 18 °C, and 28 °C. 143 genes were extracted as highly expressed genes at high temperatures with FC > 2. These 143 genes were then used in the gene set enrichment analysis. As oxidative stress pathway was enriched, gene expression intensities of relative genes were extracted and used in the heatmap shown in the right-hand side. b Differentially expressed genes among Sc culture samples for different light conditions. 251 genes were extracted as highly expressed genes at lighter condition with FC > 2. Following steps are the same as above. c Differentially expressed genes among Sc culture samples for different nutrient conditions. 233 genes were extracted as highly expressed genes at abundant nitrogen condition. Following steps are the same as above

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