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Table 1 Comparison of genome assembly results of Sc using four different assemblers

From: Comparative genome and transcriptome analysis of diatom, Skeletonema costatum, reveals evolution of genes for harmful algal bloom

  Genome size #Scaffolds Longest scaffold Average length N50
WGS 60.2 M 38.8 K 89.1 K 1.6 K 4.7 K
Platanus 46.9 M 62.1 K 122.6 K 0.8 K 24 K
Allpaths-LG 29.7 M 6.2 K 4.8 K 4.8 K 8.6 K
SOAPdenovo2 52.7 M 150.5 K 0.4 K 0.4 K 0.8 K