Table 1 General features of Dickeya strains and genomes used for genomic comparison
Strain | Species | Genome length (Mb) | G + C % | Complete/draft genome | Isolated from | Geographic origin | Year of isolation |
|---|---|---|---|---|---|---|---|
PA1 (CP020872) | D. fangzhongdai | 4.98 | 56.88 | Complete | Phalaenopsis orchid | Guangdong, China | 2011 |
DSM101947 (CP025003a) | 5.03 | 56.79 | Complete | Pyrus pyrifolia | Zhejiang, China | 2009 | |
B16 (NZ_JXBN00000000) | 4.89 | 56.70 | Draft | Phalaenopsis orchid | Slovenia | 2010 | |
S1 (NZ_JXBO00000000) | 4.89 | 56.80 | Draft | Phalaenopsis orchid | Slovenia | 2012 | |
ND14b (CP015137) | 5.05 | 56.90 | Complete | Waterfall | Malaysia | 2013 | |
M005 (NZ_JSXD00000000) | 5.11 | 56.60 | Draft | Waterfall | Malaysia | 2013 | |
M074 (NZ_JRWY00000000) | 4.95 | 56.80 | Draft | Waterfall | Malaysia | 2013 | |
3937 (CP002038) | D. dadantii subsp. dadantii | 4.92 | 56.30 | Complete | Saintpaulia ionantha | France | 1977 |
NCPPB3537 (CM001982) | 4.81 | 56.48 | Draft | Solanum tuberosum | Peru | Â | |
NCPPB898 (CM001976) (Tb) | 4.94 | 56.30 | Draft | Pelargonium capitatum | Comoros | 1960 | |
NCPPB2976 (CM001978) (T) | D. dadantii subsp. dieffenbachiae | 4.8 | 56.41 | Draft | Dieffenbachia sp. | USA | 1977 |
IPO2222 (CP015137) | D. solani | 4.92 | 56.20 | Complete | Solanum tuberosum | Netherlands | 2007 |
MK10 (CM001839) | 4.94 | 56.20 | Draft | Solanum tuberosum | Israel | Â | |
Ech1591 (CP001655) | D. chrysanthemi | 4.81 | 54.50 | Complete | Zea mays | USA | 1957 |
NCPPB516 (CM001904) | 4.62 | 54.24 | Draft | Parthenium argentatum | Denmark | 1957 | |
NCPPB3534 (CM001840) | D. dianthicola | 4.87 | 55.64 | Draft | Solanum tuberosum | Netherlands | 1987 |
NCPPB453 (CM001841)(T) | 4.68 | 55.95 | Draft | Dianthus caryophyllus | UK | 1956 | |
Ech703 (CP001654) | D. paradisiaca | 4.68 | 55.00 | Complete | Solanum tuberosum | Australia |  |
NCPPB2511 (CM001857)(T) | 4.63 | 55.00 | Draft | Musa paradisiaca | Colombia | 1970 | |
EC1 (CP006929) | D. zeae | 4.53 | 53.40 | Complete | Oryza.sativa | Guangdong, China | 1997 |
ZJU1202 (NZ_AJVN00000000) | 4.59 | 53.30 | Draft | Oryza.sativa | Guangdong, China | 2012 | |
MS1 (NZ_APWM00000000) | 4.75 | 53.30 | Draft | Musa sp. | Guangdong, China | 2009 | |
Ech586 (CP001836) | 4.82 | 53.60 | Complete | Philodendron Schott | USA | Â | |
NCPPB 3532 (CM001858) | 4.56 | 53.60 | Draft | Solanum tuberosum | Australia | Â |