Skip to main content

Table 1 Summary of the assembled transcripts of C. sinica and C. masuca

From: Development of polymorphic microsatellite markers by using de novo transcriptome assembly of Calanthe masuca and C. sinica (Orchidaceae)

 

C. masuca

C. sinica

Transcripts

Unigenes

Transcripts

Unigenes

Number of sequences

40,916

50,112

71,618

90,173

Total nucleotide bases

28,791,330

38,475,376

44,788,570

64,336,080

GC content (%)

44.44

44.27

43.06

43.00

Maximum length (bp)

12,973

12,973

16,684

16,684

Average length (bp)

703.67

767.97

625.3

713.47

N50

1,196

1,296

1,086

1,285