Skip to main content

Table 4 Human and gorilla Y-chromosome assembly statistics

From: Correcting palindromes in long reads after whole-genome amplification

 

Assembly size (Mbp)

Ns (Mbp)

Non-Ns (Mbp)

No. sequences

N50 (Kbp)

Longest seq. (Kbp)

HumY

57.2

30.4

26.8

1

 

57,227

GorY, contigs

23.0

0

23.0

3001

18

143

GorY, scaffolds

25.4

2.4

23.0

697

98

486

GorY-WGA, contigs

26.5

0

26.5

1128

32

256

GorY-Clean, contigs

24.3

0

24.3

1062

42

494

  1. Assembly statistics for the published human and gorilla Y chromosome assemblies and the new assemblies